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reproducibility

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Motiejus Jakštys 2021-05-13 07:43:00 +03:00
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IV/mj-msc.tex
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@ -796,7 +796,9 @@ already-working code.
\subsection{Reproducibility}
\label{sec:reproducing-the-paper}
% TODO: andriub: Turi būti aiškiai nurodytos instrukcijos, kaip atkartoti veiksmus. Tam gali įdėti trumpą tekstą, kad rezultatais pasidalinta github, projekto pasileidimui reikalavimai nurodyti programinio kodo readme apraše.
% TODO done: andriub: Turi būti aiškiai nurodytos instrukcijos, kaip atkartoti
% veiksmus. Tam gali įdėti trumpą tekstą, kad rezultatais pasidalinta github,
% projekto pasileidimui reikalavimai nurodyti programinio kodo readme apraše.
It is widely believed that the ability to reproduce the results of a published
study is important to the scientific community. In practice, however, it is
@ -810,6 +812,9 @@ of it, all the illustrations in this paper are generated using that algorithm,
from a predefined list of test geometries (test geometries were explained in
section~\ref{sec:automated-tests}).
Besides embedded in this document, this article itself, and code for this
article are accessible on github as of 2021-05-21\cite{wmsql}.
Instructions how to re-generate all the visualizations are found in
appendix~\ref{sec:code-regenerate}. The visualization code serves as a good
example reference for anyone willing to start using the algorithm.
@ -1319,7 +1324,12 @@ This section contains code listings of a subset of files tightly related to the
Like explained in section~\ref{sec:reproducing-the-paper}, illustrations in
this paper are generated from a small list of sample geometries. To observe
the source geometries or regenerate this paper, run this script (assuming
name of this document is {\tt mj-msc-full.pdf}):
name of this document is \textsc{mj-msc-full.pdf}).
This script will extract the source files from the \textsc{mj-msc-full.pdf} to
a temporary directory, run the top-level \textsc{make} command, and display
the generated document. Source code for the algorithm, as well as other
supporting files, can be found in the temporary directory.
\inputcode{bash}{extract-and-generate}