turbonss/src/fch.c

#include "fch.h"
#include "cmph_structs.h"
#include "fch_structs.h"
#include "hash.h"
#include "bitbool.h"
#include "fch_buckets.h"
//#include <sys/time.h>
#include <time.h>
#include <math.h>
#include <stdlib.h>
#include <stdio.h>
#include <assert.h>
#include <string.h>
#define INDEX 0 /* alignment index within a bucket */
//#define DEBUG
#include "debug.h"

static cmph_uint32 mixh10h11h12(cmph_uint32 b, cmph_float32 p1, cmph_float32 p2, cmph_uint32 initial_index);
static void calc_parameters(fch_config_data_t *fch);
static fch_buckets_t * mapping(cmph_config_t *mph);
static cmph_uint32 * ordering(fch_buckets_t * buckets);
static cmph_uint8 check_for_collisions_h2(fch_config_data_t *fch, fch_buckets_t * buckets);
static void permut(cmph_uint32 * vector, cmph_uint32 n);
static cmph_uint8 searching(fch_config_data_t *fch, fch_buckets_t *buckets, cmph_uint32 *sorted_indexes);

fch_config_data_t *fch_config_new()
{
	fch_config_data_t *fch;
	fch = (fch_config_data_t *)malloc(sizeof(fch_config_data_t));
	assert(fch);
	memset(fch, 0, sizeof(fch_config_data_t));
	fch->hashfuncs[0] = CMPH_HASH_JENKINS;
	fch->hashfuncs[1] = CMPH_HASH_JENKINS;
	fch->m = fch->b = 0;
	fch->c = fch->p1 = fch->p2 = 0;
	fch->g = NULL;
	fch->h1 = NULL;
	fch->h2 = NULL;
	return fch;
}

void fch_config_destroy(cmph_config_t *mph)
{
	fch_config_data_t *data = (fch_config_data_t *)mph->data;
	//DEBUGP("Destroying algorithm dependent data\n");
	free(data);
}

void fch_config_set_hashfuncs(cmph_config_t *mph, CMPH_HASH *hashfuncs)
{
	fch_config_data_t *fch = (fch_config_data_t *)mph->data;
	CMPH_HASH *hashptr = hashfuncs;
	cmph_uint32 i = 0;
	while(*hashptr != CMPH_HASH_COUNT)
	{
		if (i >= 2) break; //fch only uses two hash functions
		fch->hashfuncs[i] = *hashptr;	
		++i, ++hashptr;
	}
}

static cmph_uint32 mixh10h11h12(cmph_uint32 b, cmph_float32 p1, cmph_float32 p2, cmph_uint32 initial_index)
{
	if (initial_index < p1)  initial_index %= (cmph_uint32)p2;  /* h11 o h10 */
	else { /* h12 o h10 */
		initial_index %= b;
		if(initial_index < p2) initial_index += (cmph_uint32)p2;
	}
	return initial_index;
}

static void calc_parameters(fch_config_data_t *fch)
{
	fch->b = (cmph_uint32)ceil((fch->c*fch->m)/(log(fch->m)/log(2) + 1));
	fch->p1 = ceil(0.6*fch->m);
	fch->p2 = ceil(0.3*fch->b);
}

static fch_buckets_t * mapping(cmph_config_t *mph)
{
//	struct timeval seed;
	cmph_uint32 i = 0;
	fch_buckets_t *buckets = NULL;
	fch_config_data_t *fch = (fch_config_data_t *)mph->data;
//	gettimeofday(&seed,NULL);        
//	srand((cmph_uint32)((seed.tv_sec + 1001*seed.tv_usec))); 
	srand((cmph_uint32)time(NULL)); 
	if (fch->h1) hash_state_destroy(fch->h1);
	fch->h1 = hash_state_new(fch->hashfuncs[0], fch->m);  
	calc_parameters (fch);
	buckets = fch_buckets_new(fch->b);

	mph->key_source->rewind(mph->key_source->data);  
	for(i = 0; i < fch->m; i++)
	{
		cmph_uint32 h1, keylen;
		char *key = NULL;
		mph->key_source->read(mph->key_source->data, &key, &keylen);	
		h1 = hash(fch->h1, key, keylen) % fch->m;
		h1 = mixh10h11h12 (fch->b, fch->p1, fch->p2, h1);
		fch_buckets_insert(buckets, h1, key, keylen);
		key = NULL; // transger memory ownership
		
	}
	return buckets;  
}


// returns the buckets indexes sorted by their sizes. 
static cmph_uint32 * ordering(fch_buckets_t * buckets)
{
  return fch_buckets_get_indexes_sorted_by_size(buckets);
}

/* Check whether function h2 causes collisions among the keys of each bucket */ 
static cmph_uint8 check_for_collisions_h2(fch_config_data_t *fch, fch_buckets_t * buckets)
{
	//cmph_uint32 max_size = fch_buckets_get_max_size(buckets);
	cmph_uint8 * hashtable = (cmph_uint8 *)calloc(fch->m, sizeof(cmph_uint8));
	cmph_uint32 nbuckets = fch_buckets_get_nbuckets(buckets);
	cmph_uint32 i = 0, index = 0, j =0;
	for (i = 0; i < nbuckets; i++)
	{
		cmph_uint32 nkeys = fch_buckets_get_size(buckets, i);
		memset(hashtable, 0, fch->m);
		for (j = 0; j < nkeys; j++)
		{
			char * key = fch_buckets_get_key(buckets, i, j);
			cmph_uint32 keylen = fch_buckets_get_keylength(buckets, i, j);
			index = hash(fch->h2, key, keylen) % fch->m;
			if(hashtable[index]) { // collision detected
				free(hashtable);
				return 1;
			}
			hashtable[index] = 1;
		}
	}
	free(hashtable);
	return 0;
}

static void permut(cmph_uint32 * vector, cmph_uint32 n)
{ 
  cmph_uint32 i, j, b;
  srand((cmph_uint32)time(NULL)); 
  for (i = 0; i < n; i++) {
    j = rand() % n;
    b = vector[i];
    vector[i] = vector[j];
    vector[j] = b;
  }
}

static cmph_uint8 searching(fch_config_data_t *fch, fch_buckets_t *buckets, cmph_uint32 *sorted_indexes)
{
	cmph_uint32 * random_table = (cmph_uint32 *) calloc(fch->m, sizeof(cmph_uint32));
	cmph_uint32 * map_table    = (cmph_uint32 *) calloc(fch->m, sizeof(cmph_uint32));
	cmph_uint32 iteration_to_generate_h2 = 0;
	cmph_uint32 searching_iterations     = 0;
	cmph_uint8 restart                   = 0;
	cmph_uint32 nbuckets                 = fch_buckets_get_nbuckets(buckets);
	cmph_uint32 i, j, z, counter = 0, filled_count = 0;
	if (fch->g) free (fch->g);
	fch->g = (cmph_uint32 *) calloc(fch->b, sizeof(cmph_uint32));

	for(i = 0; i < fch->m; i++)
	{
		random_table[i] = i;
	}
	permut(random_table, fch->m);
	for(i = 0; i < fch->m; i++)
	{
		map_table[random_table[i]] = i;
	}
	
	//DEBUGP("max bucket size: %u\n", fch_buckets_get_max_size(buckets));

	do {   
		srand((cmph_uint32)time(NULL)); 
		if (fch->h2) hash_state_destroy(fch->h2);
		fch->h2 = hash_state_new(fch->hashfuncs[1], fch->m);  
		restart = check_for_collisions_h2(fch, buckets);
		filled_count = 0;
		if (!restart) searching_iterations++;
		else iteration_to_generate_h2++;
		for(i = 0; (i < nbuckets) && !restart; i++) {
			restart = 1; // true
			for(z = 0; (z < (fch->m - filled_count)) && restart; z++) {
				char * key = fch_buckets_get_key(buckets, sorted_indexes[i], INDEX);
				cmph_uint32 keylen = fch_buckets_get_keylength(buckets, sorted_indexes[i], INDEX);
				cmph_uint32 h2 = hash(fch->h2, key, keylen) % fch->m;
				cmph_uint32 bucketsize = fch_buckets_get_size(buckets, sorted_indexes[i]);
				counter = 0; 
				restart = 0; // false
				fch->g[sorted_indexes[i]] = (fch->m + random_table[filled_count + z] - h2) % fch->m;
				j = INDEX;
				do {
					cmph_uint32 index = 0;
					key = fch_buckets_get_key(buckets, sorted_indexes[i], j);
					keylen = fch_buckets_get_keylength(buckets, sorted_indexes[i], j);
					h2 = hash(fch->h2, key, keylen) % fch->m;
					index = (h2 + fch->g[sorted_indexes[i]]) % fch->m;
					if (map_table[index] >= filled_count) {  
						cmph_uint32 y  = map_table[index];
						cmph_uint32 ry = random_table[y];
						random_table[y] = random_table[filled_count];
						random_table[filled_count] = ry;
						map_table[random_table[y]] = y;
						map_table[random_table[filled_count]] = filled_count;
						filled_count++;
						counter ++; 
					}
					else { 
						restart = 1; // true
						filled_count = filled_count - counter;
						counter = 0; 
						break;
					}
					j = (j + 1) % bucketsize;
				} while(j % bucketsize != INDEX); 
			}
		}              
	} while(restart  && (searching_iterations < 100000));
	free(map_table);
	free(random_table);
	return restart;
}



cmph_t *fch_new(cmph_config_t *mph, float c)
{
	cmph_t *mphf = NULL;
	fch_data_t *fchf = NULL;
	cmph_uint32 iterations = 100;
	cmph_uint8 restart_mapping = 0;
	fch_buckets_t * buckets = NULL;
	cmph_uint32 * sorted_indexes = NULL;
	fch_config_data_t *fch = (fch_config_data_t *)mph->data;
	fch->m = mph->key_source->nkeys;
	//DEBUGP("m: %f\n", fch->m);
	fch->c = c;
	//DEBUGP("c: %f\n", fch->c);
	fch->h1 = NULL;
	fch->h2 = NULL;
	fch->g = NULL;
	do
	{	  
		if (mph->verbosity)
		{
			fprintf(stderr, "Entering mapping step for mph creation of %u keys\n", fch->m);
		}
		if (buckets) fch_buckets_destroy(buckets);
		buckets = mapping(mph);
		if (mph->verbosity)
		{
			fprintf(stderr, "Starting ordering step\n");
		}
		if (sorted_indexes) free (sorted_indexes);
		sorted_indexes = ordering(buckets);
		if (mph->verbosity)
		{
			fprintf(stderr, "Starting searching step.\n");
		}
		restart_mapping = searching(fch, buckets, sorted_indexes);
		
        } while(restart_mapping && iterations > 0);
	if (buckets) fch_buckets_destroy(buckets);
	if (sorted_indexes) free (sorted_indexes);
	if (iterations == 0) return NULL;
	mphf = (cmph_t *)malloc(sizeof(cmph_t));
	mphf->algo = mph->algo;
	fchf = (fch_data_t *)malloc(sizeof(fch_data_t));
	fchf->g = fch->g;
	fch->g = NULL; //transfer memory ownership
	fchf->h1 = fch->h1;
	fch->h1 = NULL; //transfer memory ownership
	fchf->h2 = fch->h2;
	fch->h2 = NULL; //transfer memory ownership
	fchf->p2 = fch->p2;
	fchf->p1 = fch->p1;
	fchf->b = fch->b;
	fchf->c = fch->c;
	fchf->m = fch->m;
	mphf->data = fchf;
	mphf->size = fch->m;
	//DEBUGP("Successfully generated minimal perfect hash\n");
	if (mph->verbosity)
	{
		fprintf(stderr, "Successfully generated minimal perfect hash function\n");
	}
	return mphf;
}

int fch_dump(cmph_t *mphf, FILE *fd)
{
	char *buf = NULL;
	cmph_uint32 buflen;
	fch_data_t *data = (fch_data_t *)mphf->data;
	__cmph_dump(mphf, fd);

	hash_state_dump(data->h1, &buf, &buflen);
	//DEBUGP("Dumping hash state with %u bytes to disk\n", buflen);
	fwrite(&buflen, sizeof(cmph_uint32), 1, fd);
	fwrite(buf, buflen, 1, fd);
	free(buf);

	hash_state_dump(data->h2, &buf, &buflen);
	//DEBUGP("Dumping hash state with %u bytes to disk\n", buflen);
	fwrite(&buflen, sizeof(cmph_uint32), 1, fd);
	fwrite(buf, buflen, 1, fd);
	free(buf);

	fwrite(&(data->m), sizeof(cmph_uint32), 1, fd);
	fwrite(&(data->c), sizeof(cmph_float32), 1, fd);
	fwrite(&(data->b), sizeof(cmph_uint32), 1, fd);
	fwrite(&(data->p1), sizeof(cmph_float32), 1, fd);
	fwrite(&(data->p2), sizeof(cmph_float32), 1, fd);
	
	fwrite(data->g, sizeof(cmph_uint32)*(data->b), 1, fd);
	#ifdef DEBUG
	cmph_uint32 i;
	fprintf(stderr, "G: ");
	for (i = 0; i < data->b; ++i) fprintf(stderr, "%u ", data->g[i]);
	fprintf(stderr, "\n");
	#endif
	return 1;
}

void fch_load(FILE *f, cmph_t *mphf)
{
	char *buf = NULL;
	cmph_uint32 buflen;
	fch_data_t *fch = (fch_data_t *)malloc(sizeof(fch_data_t));

	//DEBUGP("Loading fch mphf\n");
	mphf->data = fch;
	//DEBUGP("Reading h1\n");
	fch->h1 = NULL;
	fread(&buflen, sizeof(cmph_uint32), 1, f);
	//DEBUGP("Hash state of h1 has %u bytes\n", buflen);
	buf = (char *)malloc(buflen);
	fread(buf, buflen, 1, f);
	fch->h1 = hash_state_load(buf, buflen);
	free(buf);
	
	//DEBUGP("Loading fch mphf\n");
	mphf->data = fch;
	//DEBUGP("Reading h2\n");
	fch->h2 = NULL;
	fread(&buflen, sizeof(cmph_uint32), 1, f);
	//DEBUGP("Hash state of h2 has %u bytes\n", buflen);
	buf = (char *)malloc(buflen);
	fread(buf, buflen, 1, f);
	fch->h2 = hash_state_load(buf, buflen);
	free(buf);
	
	
	//DEBUGP("Reading m and n\n");
	fread(&(fch->m), sizeof(cmph_uint32), 1, f);
	fread(&(fch->c), sizeof(cmph_float32), 1, f);
	fread(&(fch->b), sizeof(cmph_uint32), 1, f);
	fread(&(fch->p1), sizeof(cmph_float32), 1, f);
	fread(&(fch->p2), sizeof(cmph_float32), 1, f);

	fch->g = (cmph_uint32 *)malloc(sizeof(cmph_uint32)*fch->b);
	fread(fch->g, fch->b*sizeof(cmph_uint32), 1, f);
	#ifdef DEBUG
	cmph_uint32 i;
	fprintf(stderr, "G: ");
	for (i = 0; i < fch->b; ++i) fprintf(stderr, "%u ", fch->g[i]);
	fprintf(stderr, "\n");
	#endif
	return;
}

cmph_uint32 fch_search(cmph_t *mphf, const char *key, cmph_uint32 keylen)
{
	fch_data_t *fch = mphf->data;
	cmph_uint32 h1 = hash(fch->h1, key, keylen) % fch->m;
	cmph_uint32 h2 = hash(fch->h2, key, keylen) % fch->m;
	h1 = hash(fch->h1, key, keylen) % fch->m;
	h1 = mixh10h11h12 (fch->b, fch->p1, fch->p2, h1);
	//DEBUGP("key: %s h1: %u h2: %u  g[h1]: %u\n", key, h1, h2, fch->g[h1]);
	return (h2 + fch->g[h1]) % fch->m;
}
void fch_destroy(cmph_t *mphf)
{
	fch_data_t *data = (fch_data_t *)mphf->data;
	free(data->g);
	hash_state_destroy(data->h1);
	hash_state_destroy(data->h2);
	free(data);
	free(mphf);
}