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This commit is contained in:
Davi Reis
2009-07-04 20:17:36 -07:00
parent cbb817ddef
commit 250afcb75f
6 changed files with 146 additions and 159 deletions
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src/Makefile
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@@ -1,8 +1,8 @@
# Makefile.in generated by automake 1.10.1 from Makefile.am.
# Makefile.in generated by automake 1.10 from Makefile.am.
# src/Makefile. Generated from Makefile.in by configure.
# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
# 2003, 2004, 2005, 2006, 2007, 2008 Free Software Foundation, Inc.
# 2003, 2004, 2005, 2006 Free Software Foundation, Inc.
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
@@ -32,8 +32,8 @@ POST_INSTALL = :
NORMAL_UNINSTALL = :
PRE_UNINSTALL = :
POST_UNINSTALL = :
build_triplet = x86_64-unknown-linux-gnu
host_triplet = x86_64-unknown-linux-gnu
build_triplet = i386-apple-darwin9.6.0
host_triplet = i386-apple-darwin9.6.0
bin_PROGRAMS = cmph$(EXEEXT)
subdir = src
DIST_COMMON = $(include_HEADERS) $(srcdir)/Makefile.am \
@@ -59,9 +59,9 @@ LTLIBRARIES = $(lib_LTLIBRARIES)
libcmph_la_LIBADD =
am_libcmph_la_OBJECTS = hash.lo jenkins_hash.lo vstack.lo vqueue.lo \
graph.lo cmph.lo cmph_structs.lo chm.lo bmz.lo bmz8.lo bdz.lo \
bdz_ph.lo buffer_manager.lo buffer_entry.lo brz.lo fch.lo \
fch_buckets.lo select.lo compressed_seq.lo chd_ph.lo \
miller_rabin.lo
bdz_ph.lo brz.lo fch.lo fch_buckets.lo chd.lo chd_ph.lo \
miller_rabin.lo buffer_manager.lo buffer_entry.lo select.lo \
compressed_seq.lo compressed_rank.lo
libcmph_la_OBJECTS = $(am_libcmph_la_OBJECTS)
libcmph_la_LINK = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) \
$(LIBTOOLFLAGS) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
@@ -90,52 +90,49 @@ HEADERS = $(include_HEADERS)
ETAGS = etags
CTAGS = ctags
DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
ACLOCAL = ${SHELL} /home/fbotelho/papers/conferences/djamel/cmph/missing --run aclocal-1.10
AMTAR = ${SHELL} /home/fbotelho/papers/conferences/djamel/cmph/missing --run tar
ACLOCAL = ${SHELL} /Users/davi/vc/cmph/missing --run aclocal-1.10
AMTAR = ${SHELL} /Users/davi/vc/cmph/missing --run tar
AR = ar
AUTOCONF = ${SHELL} /home/fbotelho/papers/conferences/djamel/cmph/missing --run autoconf
AUTOHEADER = ${SHELL} /home/fbotelho/papers/conferences/djamel/cmph/missing --run autoheader
AUTOMAKE = ${SHELL} /home/fbotelho/papers/conferences/djamel/cmph/missing --run automake-1.10
AWK = gawk
AUTOCONF = ${SHELL} /Users/davi/vc/cmph/missing --run autoconf
AUTOHEADER = ${SHELL} /Users/davi/vc/cmph/missing --run autoheader
AUTOMAKE = ${SHELL} /Users/davi/vc/cmph/missing --run automake-1.10
AWK = awk
CC = gcc
CCDEPMODE = depmode=gcc3
CFLAGS = -O3 -Wall -Werror -lm
CFLAGS = -g -O2
CPP = gcc -E
CPPFLAGS =
CXX = g++
CXXCPP = g++ -E
CXXDEPMODE = depmode=gcc3
CXXFLAGS = -g -O2
CYGPATH_W = echo
DEFS = -DHAVE_CONFIG_H
DEPDIR = .deps
DSYMUTIL =
DUMPBIN =
ECHO = echo
ECHO_C =
ECHO_N = -n
ECHO_T =
EGREP = /bin/grep -E
EGREP = /usr/bin/grep -E
EXEEXT =
FGREP = /bin/grep -F
F77 =
FFLAGS =
GETCONF = getconf
GREP = /bin/grep
GREP = /usr/bin/grep
INSTALL = /usr/bin/install -c
INSTALL_DATA = ${INSTALL} -m 644
INSTALL_PROGRAM = ${INSTALL}
INSTALL_SCRIPT = ${INSTALL}
INSTALL_STRIP_PROGRAM = $(install_sh) -c -s
LD = /usr/bin/ld -m elf_x86_64
LDFLAGS =
LIBM =
LIBOBJS =
LIBS =
LIBTOOL = $(SHELL) $(top_builddir)/libtool
LIPO =
LN_S = ln -s
LTLIBOBJS =
MAKEINFO = ${SHELL} /home/fbotelho/papers/conferences/djamel/cmph/missing --run makeinfo
MKDIR_P = /bin/mkdir -p
NM = /usr/bin/nm -B
NMEDIT =
MAKEINFO = ${SHELL} /Users/davi/vc/cmph/missing --run makeinfo
MKDIR_P = .././install-sh -c -d
OBJEXT = o
OTOOL =
OTOOL64 =
PACKAGE = cmph
PACKAGE_BUGREPORT =
PACKAGE_NAME =
@@ -144,50 +141,49 @@ PACKAGE_TARNAME =
PACKAGE_VERSION =
PATH_SEPARATOR = :
RANLIB = ranlib
SED = /bin/sed
SET_MAKE =
SHELL = /bin/bash
SHELL = /bin/sh
STRIP = strip
VERSION = 0.8
abs_builddir = /home/fbotelho/papers/conferences/djamel/cmph/src
abs_srcdir = /home/fbotelho/papers/conferences/djamel/cmph/src
abs_top_builddir = /home/fbotelho/papers/conferences/djamel/cmph
abs_top_srcdir = /home/fbotelho/papers/conferences/djamel/cmph
VERSION = 0.9
abs_builddir = /Users/davi/vc/cmph/src
abs_srcdir = /Users/davi/vc/cmph/src
abs_top_builddir = /Users/davi/vc/cmph
abs_top_srcdir = /Users/davi/vc/cmph
ac_ct_CC = gcc
ac_ct_DUMPBIN =
ac_ct_CXX = g++
ac_ct_F77 =
am__include = include
am__leading_dot = .
am__quote =
am__tar = ${AMTAR} chof - "$$tardir"
am__untar = ${AMTAR} xf -
bindir = ${exec_prefix}/bin
build = x86_64-unknown-linux-gnu
build = i386-apple-darwin9.6.0
build_alias =
build_cpu = x86_64
build_os = linux-gnu
build_vendor = unknown
build_cpu = i386
build_os = darwin9.6.0
build_vendor = apple
builddir = .
datadir = ${datarootdir}
datarootdir = ${prefix}/share
docdir = ${datarootdir}/doc/${PACKAGE}
dvidir = ${docdir}
exec_prefix = ${prefix}
host = x86_64-unknown-linux-gnu
host = i386-apple-darwin9.6.0
host_alias =
host_cpu = x86_64
host_os = linux-gnu
host_vendor = unknown
host_cpu = i386
host_os = darwin9.6.0
host_vendor = apple
htmldir = ${docdir}
includedir = ${prefix}/include
infodir = ${datarootdir}/info
install_sh = $(SHELL) /home/fbotelho/papers/conferences/djamel/cmph/install-sh
install_sh = $(SHELL) /Users/davi/vc/cmph/install-sh
libdir = ${exec_prefix}/lib
libexecdir = ${exec_prefix}/libexec
localedir = ${datarootdir}/locale
localstatedir = ${prefix}/var
lt_ECHO = echo
mandir = ${datarootdir}/man
mkdir_p = /bin/mkdir -p
mkdir_p = $(top_builddir)/./install-sh -c -d
oldincludedir = /usr/include
pdfdir = ${docdir}
prefix = /usr/local
@@ -201,15 +197,30 @@ target_alias =
top_builddir = ..
top_srcdir = ..
lib_LTLIBRARIES = libcmph.la
include_HEADERS = cmph.h cmph_types.h
libcmph_la_SOURCES = hash.c jenkins_hash.c\
vstack.c vqueue.c\
graph.c cmph.c cmph_structs.c\
chm.c bmz.c bmz8.c bdz.c bdz_ph.c\
buffer_manager.c buffer_entry.c\
brz.c fch.c fch_buckets.c \
select.c compressed_seq.c \
chd_ph.c miller_rabin.c
include_HEADERS = cmph.h cmph_types.h cmph_time.h
libcmph_la_SOURCES = hash.h hash.c \
jenkins_hash.h jenkins_hash.c\
hash_state.h debug.h \
vstack.h vstack.c vqueue.h vqueue.c\
graph.h graph.c bitbool.h \
cmph.h cmph.c cmph_structs.h cmph_structs.c\
chm.h chm.c chm_structs.h \
bmz.h bmz.c bmz_structs.h \
bmz8.h bmz8.c bmz8_structs.h \
bdz.h bdz.c bdz_structs.h \
bdz_ph.h bdz_ph.c bdz_structs_ph.h \
brz.h brz.c brz_structs.h \
fch.h fch.c fch_structs.h \
fch_buckets.h fch_buckets.c \
chd.h chd.c chd_structs.h \
chd_ph.h chd_ph.c chd_structs_ph.h \
miller_rabin.h miller_rabin.c \
buffer_manager.h buffer_manager.c \
buffer_entry.h buffer_entry.c\
select.h select.c select_lookup_tables.h \
compressed_seq.h compressed_seq.c \
compressed_rank.h compressed_rank.c \
cmph_time.h
libcmph_la_LDFLAGS = -version-info 0:0:0
cmph_SOURCES = main.c wingetopt.h wingetopt.c
@@ -253,8 +264,8 @@ install-libLTLIBRARIES: $(lib_LTLIBRARIES)
@list='$(lib_LTLIBRARIES)'; for p in $$list; do \
if test -f $$p; then \
f=$(am__strip_dir) \
echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) '$$p' '$(DESTDIR)$(libdir)/$$f'"; \
$(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) "$$p" "$(DESTDIR)$(libdir)/$$f"; \
echo " $(LIBTOOL) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) '$$p' '$(DESTDIR)$(libdir)/$$f'"; \
$(LIBTOOL) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) "$$p" "$(DESTDIR)$(libdir)/$$f"; \
else :; fi; \
done
@@ -262,8 +273,8 @@ uninstall-libLTLIBRARIES:
@$(NORMAL_UNINSTALL)
@list='$(lib_LTLIBRARIES)'; for p in $$list; do \
p=$(am__strip_dir) \
echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f '$(DESTDIR)$(libdir)/$$p'"; \
$(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f "$(DESTDIR)$(libdir)/$$p"; \
echo " $(LIBTOOL) --mode=uninstall rm -f '$(DESTDIR)$(libdir)/$$p'"; \
$(LIBTOOL) --mode=uninstall rm -f "$(DESTDIR)$(libdir)/$$p"; \
done
clean-libLTLIBRARIES:
@@ -285,8 +296,8 @@ install-binPROGRAMS: $(bin_PROGRAMS)
|| test -f $$p1 \
; then \
f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
$(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
$(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
else :; fi; \
done
@@ -321,10 +332,12 @@ include ./$(DEPDIR)/bmz8.Plo
include ./$(DEPDIR)/brz.Plo
include ./$(DEPDIR)/buffer_entry.Plo
include ./$(DEPDIR)/buffer_manager.Plo
include ./$(DEPDIR)/chd.Plo
include ./$(DEPDIR)/chd_ph.Plo
include ./$(DEPDIR)/chm.Plo
include ./$(DEPDIR)/cmph.Plo
include ./$(DEPDIR)/cmph_structs.Plo
include ./$(DEPDIR)/compressed_rank.Plo
include ./$(DEPDIR)/compressed_seq.Plo
include ./$(DEPDIR)/fch.Plo
include ./$(DEPDIR)/fch_buckets.Plo
@@ -387,8 +400,8 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
unique=`for i in $$list; do \
if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
done | \
$(AWK) '{ files[$$0] = 1; nonemtpy = 1; } \
END { if (nonempty) { for (i in files) print i; }; }'`; \
$(AWK) ' { files[$$0] = 1; } \
END { for (i in files) print i; }'`; \
mkid -fID $$unique
tags: TAGS
@@ -400,8 +413,8 @@ TAGS: $(HEADERS) $(SOURCES) $(TAGS_DEPENDENCIES) \
unique=`for i in $$list; do \
if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
done | \
$(AWK) '{ files[$$0] = 1; nonempty = 1; } \
END { if (nonempty) { for (i in files) print i; }; }'`; \
$(AWK) ' { files[$$0] = 1; } \
END { for (i in files) print i; }'`; \
if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
test -n "$$unique" || unique=$$empty_fix; \
$(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
@@ -411,12 +424,13 @@ ctags: CTAGS
CTAGS: $(HEADERS) $(SOURCES) $(TAGS_DEPENDENCIES) \
$(TAGS_FILES) $(LISP)
tags=; \
here=`pwd`; \
list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
unique=`for i in $$list; do \
if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
done | \
$(AWK) '{ files[$$0] = 1; nonempty = 1; } \
END { if (nonempty) { for (i in files) print i; }; }'`; \
$(AWK) ' { files[$$0] = 1; } \
END { for (i in files) print i; }'`; \
test -z "$(CTAGS_ARGS)$$tags$$unique" \
|| $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
$$tags $$unique