Added new files.

INSTALL

@@ -2,10 +2,12 @@ Installation Instructions
 *************************
 
 Copyright (C) 1994, 1995, 1996, 1999, 2000, 2001, 2002, 2004, 2005,
-2006 Free Software Foundation, Inc.
+2006, 2007, 2008, 2009 Free Software Foundation, Inc.
 
-This file is free documentation; the Free Software Foundation gives
+   Copying and distribution of this file, with or without modification,
-unlimited permission to copy, distribute and modify it.
+are permitted in any medium without royalty provided the copyright
+notice and this notice are preserved.  This file is offered as-is,
+without warranty of any kind.
 
 Basic Installation
 ==================
@@ -13,7 +15,11 @@ Basic Installation
    Briefly, the shell commands `./configure; make; make install' should
 configure, build, and install this package.  The following
 more-detailed instructions are generic; see the `README' file for
-instructions specific to this package.
+instructions specific to this package.  Some packages provide this
+`INSTALL' file but do not implement all of the features documented
+below.  The lack of an optional feature in a given package is not
+necessarily a bug.  More recommendations for GNU packages can be found
+in *note Makefile Conventions: (standards)Makefile Conventions.
 
    The `configure' shell script attempts to guess correct values for
 various system-dependent variables used during compilation.  It uses
@@ -53,12 +59,22 @@ The simplest way to compile this package is:
   2. Type `make' to compile the package.
 
   3. Optionally, type `make check' to run any self-tests that come with
-     the package.
+     the package, generally using the just-built uninstalled binaries.
 
   4. Type `make install' to install the programs and any data files and
-     documentation.
+     documentation.  When installing into a prefix owned by root, it is
+     recommended that the package be configured and built as a regular
+     user, and only the `make install' phase executed with root
+     privileges.
 
-  5. You can remove the program binaries and object files from the
+  5. Optionally, type `make installcheck' to repeat any self-tests, but
+     this time using the binaries in their final installed location.
+     This target does not install anything.  Running this target as a
+     regular user, particularly if the prior `make install' required
+     root privileges, verifies that the installation completed
+     correctly.
+
+  6. You can remove the program binaries and object files from the
      source code directory by typing `make clean'.  To also remove the
      files that `configure' created (so you can compile the package for
      a different kind of computer), type `make distclean'.  There is
@@ -67,12 +83,22 @@ The simplest way to compile this package is:
      all sorts of other programs in order to regenerate files that came
      with the distribution.
 
+  7. Often, you can also type `make uninstall' to remove the installed
+     files again.  In practice, not all packages have tested that
+     uninstallation works correctly, even though it is required by the
+     GNU Coding Standards.
+
+  8. Some packages, particularly those that use Automake, provide `make
+     distcheck', which can by used by developers to test that all other
+     targets like `make install' and `make uninstall' work correctly.
+     This target is generally not run by end users.
+
 Compilers and Options
 =====================
 
-Some systems require unusual options for compilation or linking that the
+   Some systems require unusual options for compilation or linking that
-`configure' script does not know about.  Run `./configure --help' for
+the `configure' script does not know about.  Run `./configure --help'
-details on some of the pertinent environment variables.
+for details on some of the pertinent environment variables.
 
    You can give `configure' initial values for configuration parameters
 by setting variables in the command line or in the environment.  Here
@@ -90,20 +116,36 @@ same time, by placing the object files for each architecture in their
 own directory.  To do this, you can use GNU `make'.  `cd' to the
 directory where you want the object files and executables to go and run
 the `configure' script.  `configure' automatically checks for the
-source code in the directory that `configure' is in and in `..'.
+source code in the directory that `configure' is in and in `..'.  This
+is known as a "VPATH" build.
 
    With a non-GNU `make', it is safer to compile the package for one
 architecture at a time in the source code directory.  After you have
 installed the package for one architecture, use `make distclean' before
 reconfiguring for another architecture.
 
+   On MacOS X 10.5 and later systems, you can create libraries and
+executables that work on multiple system types--known as "fat" or
+"universal" binaries--by specifying multiple `-arch' options to the
+compiler but only a single `-arch' option to the preprocessor.  Like
+this:
+
+     ./configure CC="gcc -arch i386 -arch x86_64 -arch ppc -arch ppc64" \
+                 CXX="g++ -arch i386 -arch x86_64 -arch ppc -arch ppc64" \
+                 CPP="gcc -E" CXXCPP="g++ -E"
+
+   This is not guaranteed to produce working output in all cases, you
+may have to build one architecture at a time and combine the results
+using the `lipo' tool if you have problems.
+
 Installation Names
 ==================
 
    By default, `make install' installs the package's commands under
 `/usr/local/bin', include files under `/usr/local/include', etc.  You
 can specify an installation prefix other than `/usr/local' by giving
-`configure' the option `--prefix=PREFIX'.
+`configure' the option `--prefix=PREFIX', where PREFIX must be an
+absolute file name.
 
    You can specify separate installation prefixes for
 architecture-specific files and architecture-independent files.  If you
@@ -114,15 +156,46 @@ Documentation and other data files still use the regular prefix.
    In addition, if you use an unusual directory layout you can give
 options like `--bindir=DIR' to specify different values for particular
 kinds of files.  Run `configure --help' for a list of the directories
-you can set and what kinds of files go in them.
+you can set and what kinds of files go in them.  In general, the
+default for these options is expressed in terms of `${prefix}', so that
+specifying just `--prefix' will affect all of the other directory
+specifications that were not explicitly provided.
+
+   The most portable way to affect installation locations is to pass the
+correct locations to `configure'; however, many packages provide one or
+both of the following shortcuts of passing variable assignments to the
+`make install' command line to change installation locations without
+having to reconfigure or recompile.
+
+   The first method involves providing an override variable for each
+affected directory.  For example, `make install
+prefix=/alternate/directory' will choose an alternate location for all
+directory configuration variables that were expressed in terms of
+`${prefix}'.  Any directories that were specified during `configure',
+but not in terms of `${prefix}', must each be overridden at install
+time for the entire installation to be relocated.  The approach of
+makefile variable overrides for each directory variable is required by
+the GNU Coding Standards, and ideally causes no recompilation.
+However, some platforms have known limitations with the semantics of
+shared libraries that end up requiring recompilation when using this
+method, particularly noticeable in packages that use GNU Libtool.
+
+   The second method involves providing the `DESTDIR' variable.  For
+example, `make install DESTDIR=/alternate/directory' will prepend
+`/alternate/directory' before all installation names.  The approach of
+`DESTDIR' overrides is not required by the GNU Coding Standards, and
+does not work on platforms that have drive letters.  On the other hand,
+it does better at avoiding recompilation issues, and works well even
+when some directory options were not specified in terms of `${prefix}'
+at `configure' time.
+
+Optional Features
+=================
 
    If the package supports it, you can cause programs to be installed
 with an extra prefix or suffix on their names by giving `configure' the
 option `--program-prefix=PREFIX' or `--program-suffix=SUFFIX'.
 
-Optional Features
-=================
-
    Some packages pay attention to `--enable-FEATURE' options to
 `configure', where FEATURE indicates an optional part of the package.
 They may also pay attention to `--with-PACKAGE' options, where PACKAGE
@@ -135,14 +208,53 @@ find the X include and library files automatically, but if it doesn't,
 you can use the `configure' options `--x-includes=DIR' and
 `--x-libraries=DIR' to specify their locations.
 
+   Some packages offer the ability to configure how verbose the
+execution of `make' will be.  For these packages, running `./configure
+--enable-silent-rules' sets the default to minimal output, which can be
+overridden with `make V=1'; while running `./configure
+--disable-silent-rules' sets the default to verbose, which can be
+overridden with `make V=0'.
+
+Particular systems
+==================
+
+   On HP-UX, the default C compiler is not ANSI C compatible.  If GNU
+CC is not installed, it is recommended to use the following options in
+order to use an ANSI C compiler:
+
+     ./configure CC="cc -Ae -D_XOPEN_SOURCE=500"
+
+and if that doesn't work, install pre-built binaries of GCC for HP-UX.
+
+   On OSF/1 a.k.a. Tru64, some versions of the default C compiler cannot
+parse its `<wchar.h>' header file.  The option `-nodtk' can be used as
+a workaround.  If GNU CC is not installed, it is therefore recommended
+to try
+
+     ./configure CC="cc"
+
+and if that doesn't work, try
+
+     ./configure CC="cc -nodtk"
+
+   On Solaris, don't put `/usr/ucb' early in your `PATH'.  This
+directory contains several dysfunctional programs; working variants of
+these programs are available in `/usr/bin'.  So, if you need `/usr/ucb'
+in your `PATH', put it _after_ `/usr/bin'.
+
+   On Haiku, software installed for all users goes in `/boot/common',
+not `/usr/local'.  It is recommended to use the following options:
+
+     ./configure --prefix=/boot/common
+
 Specifying the System Type
 ==========================
 
-There may be some features `configure' cannot figure out automatically,
+   There may be some features `configure' cannot figure out
-but needs to determine by the type of machine the package will run on.
+automatically, but needs to determine by the type of machine the package
-Usually, assuming the package is built to be run on the _same_
+will run on.  Usually, assuming the package is built to be run on the
-architectures, `configure' can figure that out, but if it prints a
+_same_ architectures, `configure' can figure that out, but if it prints
-message saying it cannot guess the machine type, give it the
+a message saying it cannot guess the machine type, give it the
 `--build=TYPE' option.  TYPE can either be a short name for the system
 type, such as `sun4', or a canonical name which has the form:
 
@@ -150,7 +262,8 @@ type, such as `sun4', or a canonical name which has the form:
 
 where SYSTEM can have one of these forms:
 
-     OS KERNEL-OS
+     OS
+     KERNEL-OS
 
    See the file `config.sub' for the possible values of each field.  If
 `config.sub' isn't included in this package, then this package doesn't
@@ -168,9 +281,9 @@ eventually be run) with `--host=TYPE'.
 Sharing Defaults
 ================
 
-If you want to set default values for `configure' scripts to share, you
+   If you want to set default values for `configure' scripts to share,
-can create a site shell script called `config.site' that gives default
+you can create a site shell script called `config.site' that gives
-values for variables like `CC', `cache_file', and `prefix'.
+default values for variables like `CC', `cache_file', and `prefix'.
 `configure' looks for `PREFIX/share/config.site' if it exists, then
 `PREFIX/etc/config.site' if it exists.  Or, you can set the
 `CONFIG_SITE' environment variable to the location of the site script.
@@ -198,11 +311,19 @@ an Autoconf bug.  Until the bug is fixed you can use this workaround:
 `configure' Invocation
 ======================
 
-`configure' recognizes the following options to control how it operates.
+   `configure' recognizes the following options to control how it
+operates.
 
 `--help'
 `-h'
-     Print a summary of the options to `configure', and exit.
+     Print a summary of all of the options to `configure', and exit.
+
+`--help=short'
+`--help=recursive'
+     Print a summary of the options unique to this package's
+     `configure', and exit.  The `short' variant lists options used
+     only in the top level, while the `recursive' variant lists options
+     also present in any nested packages.
 
 `--version'
 `-V'
@@ -229,6 +350,16 @@ an Autoconf bug.  Until the bug is fixed you can use this workaround:
      Look for the package's source code in directory DIR.  Usually
      `configure' can determine that directory automatically.
 
+`--prefix=DIR'
+     Use DIR as the installation prefix.  *note Installation Names::
+     for more details, including other options available for fine-tuning
+     the installation locations.
+
+`--no-create'
+`-n'
+     Run the configure checks, but stop before creating any output
+     files.
+
 `configure' also accepts some other, not widely useful, options.  Run
 `configure --help' for more details.
 

Makefile.am

@@ -1,5 +1,4 @@
-SUBDIRS = src tests examples man # cdb
+SUBDIRS = src tests examples man cxxmph # cdb
-SUBDIRS = src tests examples man
 EXTRA_DIST = cmph.spec configure.ac cmph.pc.in
 
 pkgconfigdir = $(libdir)/pkgconfig

configure.ac

@@ -6,6 +6,7 @@ AM_CONFIG_HEADER(config.h)
 dnl Checks for programs.
 AC_PROG_AWK
 AC_PROG_CC
+AC_PROG_CXX
 AC_PROG_INSTALL
 AC_PROG_LN_S
 AC_PROG_LIBTOOL
@@ -35,4 +36,4 @@ dnl Checks for library functions.
 
 AC_CHECK_SPOON
 dnl AC_OUTPUT(Makefile tests/Makefile samples/Makefile)
-AC_OUTPUT(Makefile src/Makefile tests/Makefile examples/Makefile man/Makefile cmph.pc)
+AC_OUTPUT(Makefile src/Makefile tests/Makefile examples/Makefile man/Makefile cxxmph/Makefile cmph.pc)

cxxmph/.deps/cmph_hash_map_test.Po

@@ -0,0 +1,396 @@
+cmph_hash_map_test.o: cmph_hash_map_test.cc cmph_hash_map.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/backward/hash_map \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/backward/backward_warning.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/i686-pc-linux-gnu/bits/c++config.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/i686-pc-linux-gnu/bits/os_defines.h \
+  /usr/include/features.h /usr/include/sys/cdefs.h \
+  /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+  /usr/include/gnu/stubs-32.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/i686-pc-linux-gnu/bits/cpu_defines.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/backward/hashtable.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/vector \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_algobase.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/cstddef \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/stddef.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/functexcept.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/exception_defines.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/cpp_type_traits.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/ext/type_traits.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/ext/numeric_traits.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_pair.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_move.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/concept_check.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_iterator_base_types.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_iterator_base_funcs.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_iterator.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/debug/debug.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/allocator.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/i686-pc-linux-gnu/bits/c++allocator.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/ext/new_allocator.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/new \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/exception \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_construct.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_uninitialized.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_vector.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_bvector.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/vector.tcc \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/iterator \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/ostream \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/ios \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/iosfwd \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stringfwd.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/postypes.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/cwchar \
+  /usr/include/wchar.h /usr/include/stdio.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/stdarg.h \
+  /usr/include/bits/wchar.h /usr/include/xlocale.h \
+  /usr/include/bits/wchar2.h /usr/include/stdint.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/char_traits.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/cstdio \
+  /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+  /usr/include/libio.h /usr/include/_G_config.h \
+  /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+  /usr/include/bits/stdio.h /usr/include/bits/stdio2.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/localefwd.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/i686-pc-linux-gnu/bits/c++locale.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/clocale \
+  /usr/include/locale.h /usr/include/bits/locale.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/cctype \
+  /usr/include/ctype.h /usr/include/endian.h /usr/include/bits/endian.h \
+  /usr/include/bits/byteswap.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/ios_base.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/ext/atomicity.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/i686-pc-linux-gnu/bits/gthr.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/i686-pc-linux-gnu/bits/gthr-default.h \
+  /usr/include/pthread.h /usr/include/sched.h /usr/include/time.h \
+  /usr/include/bits/sched.h /usr/include/bits/time.h \
+  /usr/include/signal.h /usr/include/bits/sigset.h \
+  /usr/include/bits/pthreadtypes.h /usr/include/bits/setjmp.h \
+  /usr/include/unistd.h /usr/include/bits/posix_opt.h \
+  /usr/include/bits/environments.h /usr/include/bits/confname.h \
+  /usr/include/getopt.h /usr/include/bits/unistd.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/i686-pc-linux-gnu/bits/atomic_word.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/locale_classes.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/string \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/ostream_insert.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/cxxabi-forced.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_function.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/backward/binders.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/basic_string.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/basic_string.tcc \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/locale_classes.tcc \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/streambuf \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/streambuf.tcc \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/basic_ios.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/locale_facets.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/cwctype \
+  /usr/include/wctype.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/i686-pc-linux-gnu/bits/ctype_base.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/streambuf_iterator.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/i686-pc-linux-gnu/bits/ctype_inline.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/locale_facets.tcc \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/basic_ios.tcc \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/ostream.tcc \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/istream \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/istream.tcc \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stream_iterator.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/algorithm \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_algo.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/cstdlib \
+  /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+  /usr/include/bits/waitstatus.h /usr/include/sys/types.h \
+  /usr/include/sys/select.h /usr/include/bits/select.h \
+  /usr/include/sys/sysmacros.h /usr/include/alloca.h \
+  /usr/include/bits/stdlib.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/algorithmfwd.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_heap.h \
+  /usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4/bits/stl_tempbuf.h \
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+	    echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL_PROGRAM) $$files '$(DESTDIR)$(bindir)$$dir'"; \
+	    $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL_PROGRAM) $$files "$(DESTDIR)$(bindir)$$dir" || exit $$?; \
+	    } \
+	; done
+
+uninstall-binPROGRAMS:
+	@$(NORMAL_UNINSTALL)
+	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
+	files=`for p in $$list; do echo "$$p"; done | \
+	  sed -e 'h;s,^.*/,,;s/$(EXEEXT)$$//;$(transform)' \
+	      -e 's/$$/$(EXEEXT)/' `; \
+	test -n "$$list" || exit 0; \
+	echo " ( cd '$(DESTDIR)$(bindir)' && rm -f" $$files ")"; \
+	cd "$(DESTDIR)$(bindir)" && rm -f $$files
+
+clean-binPROGRAMS:
+	@list='$(bin_PROGRAMS)'; test -n "$$list" || exit 0; \
+	echo " rm -f" $$list; \
+	rm -f $$list || exit $$?; \
+	test -n "$(EXEEXT)" || exit 0; \
+	list=`for p in $$list; do echo "$$p"; done | sed 's/$(EXEEXT)$$//'`; \
+	echo " rm -f" $$list; \
+	rm -f $$list
+cmph_hash_map_test$(EXEEXT): $(cmph_hash_map_test_OBJECTS) $(cmph_hash_map_test_DEPENDENCIES) 
+	@rm -f cmph_hash_map_test$(EXEEXT)
+	$(CXXLINK) $(cmph_hash_map_test_OBJECTS) $(cmph_hash_map_test_LDADD) $(LIBS)
+
+mostlyclean-compile:
+	-rm -f *.$(OBJEXT)
+
+distclean-compile:
+	-rm -f *.tab.c
+
+@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/cmph_hash_map_test.Po@am__quote@
+
+.cc.o:
+@am__fastdepCXX_TRUE@	$(CXXCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
+@am__fastdepCXX_TRUE@	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
+@AMDEP_TRUE@@am__fastdepCXX_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
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+@AMDEP_TRUE@@am__fastdepCXX_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCXX_FALSE@	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCXX_FALSE@	$(CXXCOMPILE) -c -o $@ `$(CYGPATH_W) '$<'`
+
+.cc.lo:
+@am__fastdepCXX_TRUE@	$(LTCXXCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
+@am__fastdepCXX_TRUE@	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Plo
+@AMDEP_TRUE@@am__fastdepCXX_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCXX_FALSE@	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCXX_FALSE@	$(LTCXXCOMPILE) -c -o $@ $<
+
+mostlyclean-libtool:
+	-rm -f *.lo
+
+clean-libtool:
+	-rm -rf .libs _libs
+
+ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
+	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
+	mkid -fID $$unique
+tags: TAGS
+
+TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	set x; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
+	shift; \
+	if test -z "$(ETAGS_ARGS)$$*$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  if test $$# -gt 0; then \
+	    $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	      "$$@" $$unique; \
+	  else \
+	    $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	      $$unique; \
+	  fi; \
+	fi
+ctags: CTAGS
+CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
+	test -z "$(CTAGS_ARGS)$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
+	     $$unique
+
+GTAGS:
+	here=`$(am__cd) $(top_builddir) && pwd` \
+	  && $(am__cd) $(top_srcdir) \
+	  && gtags -i $(GTAGS_ARGS) "$$here"
+
+distclean-tags:
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
+
+distdir: $(DISTFILES)
+	@srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+	list='$(DISTFILES)'; \
+	  dist_files=`for file in $$list; do echo $$file; done | \
+	  sed -e "s|^$$srcdirstrip/||;t" \
+	      -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \
+	case $$dist_files in \
+	  */*) $(MKDIR_P) `echo "$$dist_files" | \
+			   sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \
+			   sort -u` ;; \
+	esac; \
+	for file in $$dist_files; do \
+	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
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+	    if test -d "$(distdir)/$$file"; then \
+	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+	    fi; \
+	    if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
+	      cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
+	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+	    fi; \
+	    cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
+	  else \
+	    test -f "$(distdir)/$$file" \
+	    || cp -p $$d/$$file "$(distdir)/$$file" \
+	    || exit 1; \
+	  fi; \
+	done
+check-am: all-am
+check: check-am
+all-am: Makefile $(PROGRAMS)
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+	for dir in "$(DESTDIR)$(bindir)"; do \
+	  test -z "$$dir" || $(MKDIR_P) "$$dir"; \
+	done
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+	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+	  `test -z '$(STRIP)' || \
+	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
+mostlyclean-generic:
+
+clean-generic:
+
+distclean-generic:
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+	-test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
+
+maintainer-clean-generic:
+	@echo "This command is intended for maintainers to use"
+	@echo "it deletes files that may require special tools to rebuild."
+clean: clean-am
+
+clean-am: clean-binPROGRAMS clean-generic clean-libtool mostlyclean-am
+
+distclean: distclean-am
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
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+	distclean-tags
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+	-rm -rf ./$(DEPDIR)
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+	mostlyclean-libtool
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+.PHONY: CTAGS GTAGS all all-am check check-am clean clean-binPROGRAMS \
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+	distclean-generic distclean-libtool distclean-tags distdir dvi \
+	dvi-am html html-am info info-am install install-am \
+	install-binPROGRAMS install-data install-data-am install-dvi \
+	install-dvi-am install-exec install-exec-am install-html \
+	install-html-am install-info install-info-am install-man \
+	install-pdf install-pdf-am install-ps install-ps-am \
+	install-strip installcheck installcheck-am installdirs \
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+	mostlyclean-compile mostlyclean-generic mostlyclean-libtool \
+	pdf pdf-am ps ps-am tags uninstall uninstall-am \
+	uninstall-binPROGRAMS
+
+
+# Tell versions [3.59,3.63) of GNU make to not export all variables.
+# Otherwise a system limit (for SysV at least) may be exceeded.
+.NOEXPORT:

cxxmph/cmph_hash_map.h

@@ -0,0 +1,159 @@
+#include <hash_map>
+#include <vector>
+#include <utility>  // for std::pair
+
+#include <cmph.h>
+
+// Save on repetitive typing.
+#define CMPH_TMPL_SPEC template <class Key, class Data, class HashFcn, class EqualKey, class Alloc> 
+#define CMPH_CLASS_SPEC cmph_hash_map<Key, Data, HashFcn, EqualKey, Alloc>
+#define CMPH_METHOD_DECL(r, m) CMPH_TMPL_SPEC typename CMPH_CLASS_SPEC::r CMPH_CLASS_SPEC::m
+
+template <class Key, class Data, class HashFcn = __gnu_cxx::hash<Key>, class EqualKey = std::equal_to<Key>, class Alloc = std::allocator<Data> > 
+class cmph_hash_map {
+ public:
+  typedef Key key_type;
+  typedef Data data_type;
+  typedef std::pair<Key, Data> value_type;
+  typedef HashFcn hasher;
+  typedef EqualKey key_equal;
+
+  typedef typename std::vector<value_type>::pointer pointer;
+  typedef typename std::vector<value_type>::reference reference;
+  typedef typename std::vector<value_type>::const_reference const_reference;
+  typedef typename std::vector<value_type>::size_type size_type;
+  typedef typename std::vector<value_type>::difference_type difference_type;
+  typedef typename std::vector<value_type>::iterator iterator;
+  typedef typename std::vector<value_type>::const_iterator const_iterator;
+
+  // For making macros simpler.
+  typedef void void_type;
+  typedef bool bool_type;
+  typedef std::pair<iterator, bool> insert_return_type;
+
+  cmph_hash_map();
+  ~cmph_hash_map();
+
+  iterator begin();
+  iterator end();
+  const_iterator begin() const;
+  const_iterator end() const;
+  size_type size() const;
+  bool empty() const;
+  void clear();
+  void erase(iterator pos);
+  void erase(const key_type& k);
+  std::pair<iterator, bool> insert(const value_type& x);
+  iterator find(const key_type& k);
+  const_iterator find(const key_type& k) const;
+  data_type& operator[](const key_type &k);
+
+  void pack() { rehash(); }
+
+ private:
+  void rehash();
+  std::vector<value_type> values_;
+  cmph_t* cmph_;
+  typedef typename __gnu_cxx::hash_map<Key, Data, HashFcn, EqualKey, Alloc> slack_type;
+  slack_type slack_;
+};
+
+CMPH_TMPL_SPEC
+bool operator==(const CMPH_CLASS_SPEC& lhs, const CMPH_CLASS_SPEC& rhs) {
+  return lhs.values_ == rhs.values_;
+}
+
+CMPH_TMPL_SPEC CMPH_CLASS_SPEC::cmph_hash_map() : cmph_(NULL) {
+  rehash();
+}
+
+CMPH_TMPL_SPEC CMPH_CLASS_SPEC::~cmph_hash_map() {
+  if(cmph_) cmph_destroy(cmph_);
+}
+
+CMPH_METHOD_DECL(insert_return_type, insert)(const value_type& x) {
+  iterator it = find(x.first);
+  if (it != end()) return std::make_pair(it, false);
+  values_.push_back(x);
+  slack_.insert(std::make_pair(x.first, values_.size() - 1));
+  if ((slack_.size() > 10 && !cmph_) ||
+      (cmph_ && slack_.size() > cmph_size(cmph_) * 2)) rehash();
+  it = find(x.first);
+  // std::cerr << "inserted " << x.first.i_ << " at " << values_.begin() - it;
+  return std::make_pair(it, true);
+}
+
+CMPH_METHOD_DECL(void_type, rehash)() {
+  if (values_.empty()) return;
+  slack_type().swap(slack_);
+  cmph_io_adapter_t* source = cmph_io_struct_vector_adapter(
+      &(values_[0]), sizeof(value_type), 0, sizeof(key_type), values_.size());
+  cmph_config_t* cmph_config = cmph_config_new(source);
+  cmph_config_set_algo(cmph_config, CMPH_CHD);
+  //  cmph_config_set_verbosity(cmph_config, 1);
+  if (cmph_) cmph_destroy(cmph_);
+  cmph_ = cmph_new(cmph_config);
+  cmph_config_destroy(cmph_config);
+  cmph_io_struct_vector_adapter_destroy(source);
+  std::vector<value_type> new_values(values_.size());
+  for (int i = 0; i < values_.size(); ++i) {
+    size_type id = cmph_search(cmph_, reinterpret_cast<const char*>(&(values_[i].first)), sizeof(key_type));
+    new_values[id] = values_[i];
+  }
+  values_.swap(new_values);
+}
+
+CMPH_METHOD_DECL(iterator, begin)() { return values_.begin(); }
+CMPH_METHOD_DECL(iterator, end)() { return values_.end(); }
+CMPH_METHOD_DECL(const_iterator, begin)() const { return values_.begin(); }
+CMPH_METHOD_DECL(const_iterator, end)() const { return values_.end(); }
+CMPH_METHOD_DECL(bool_type, empty)() const { return values_.empty(); }
+
+CMPH_METHOD_DECL(void_type, clear)() { 
+  values_.clear();
+  slack_.clear();
+  cmph_destroy(cmph_);
+  cmph_ = NULL;
+}
+
+CMPH_METHOD_DECL(void_type, erase)(iterator pos) {
+  values_.erase(pos);
+  rehash();
+}
+CMPH_METHOD_DECL(void_type, erase)(const key_type& k) {
+  iterator it = find(k);
+  if (it == end()) return;
+  erase(it);
+}
+
+CMPH_METHOD_DECL(const_iterator, find)(const key_type& k) const {
+  if (!slack_.empty()) {
+    typename slack_type::const_iterator it = slack_.find(k);
+    if (it != slack_.end()) return values_.begin() + it->second;
+  }
+  if (!cmph_) return end();
+  size_type id = cmph_search(cmph_, reinterpret_cast<const char*>(&k),
+                             sizeof(key_type));
+  if (key_equal()(values_[id].first, k)) {
+    return values_.begin() + id;
+  }
+  return end();
+}
+CMPH_METHOD_DECL(iterator, find)(const key_type& k) {
+  if (!slack_.empty()) {
+    typename slack_type::const_iterator it = slack_.find(k);
+    if (it != slack_.end()) return values_.begin() + it->second;
+  }
+  if (!cmph_) return end();
+  size_type id = cmph_search(cmph_, reinterpret_cast<const char*>(&k),
+                             sizeof(key_type));
+  if (key_equal()(values_[id].first, k)) {
+    return values_.begin() + id;
+  }
+  return end();
+}
+  
+
+CMPH_METHOD_DECL(data_type&, operator[])(const key_type& k) {
+  return insert(std::make_pair(k, data_type())).first->second;
+}

cxxmph/cmph_hash_map_test

@@ -0,0 +1,130 @@
+#! /bin/sh
+
+# cmph_hash_map_test - temporary wrapper script for .libs/cmph_hash_map_test
+# Generated by ltmain.sh (GNU libtool) 2.2.6b
+#
+# The cmph_hash_map_test program cannot be directly executed until all the libtool
+# libraries that it depends on are installed.
+#
+# This wrapper script should never be moved out of the build directory.
+# If it is, it will not operate correctly.
+
+# Sed substitution that helps us do robust quoting.  It backslashifies
+# metacharacters that are still active within double-quoted strings.
+Xsed='/bin/sed -e 1s/^X//'
+sed_quote_subst='s/\([`"$\\]\)/\\\1/g'
+
+# Be Bourne compatible
+if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
+  emulate sh
+  NULLCMD=:
+  # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
+  # is contrary to our usage.  Disable this feature.
+  alias -g '${1+"$@"}'='"$@"'
+  setopt NO_GLOB_SUBST
+else
+  case `(set -o) 2>/dev/null` in *posix*) set -o posix;; esac
+fi
+BIN_SH=xpg4; export BIN_SH # for Tru64
+DUALCASE=1; export DUALCASE # for MKS sh
+
+# The HP-UX ksh and POSIX shell print the target directory to stdout
+# if CDPATH is set.
+(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
+
+relink_command=""
+
+# This environment variable determines our operation mode.
+if test "$libtool_install_magic" = "%%%MAGIC variable%%%"; then
+  # install mode needs the following variables:
+  generated_by_libtool_version='2.2.6b'
+  notinst_deplibs=' ../src/libcmph.la'
+else
+  # When we are sourced in execute mode, $file and $ECHO are already set.
+  if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then
+    ECHO="echo"
+    file="$0"
+    # Make sure echo works.
+    if test "X$1" = X--no-reexec; then
+      # Discard the --no-reexec flag, and continue.
+      shift
+    elif test "X`{ $ECHO '\t'; } 2>/dev/null`" = 'X\t'; then
+      # Yippee, $ECHO works!
+      :
+    else
+      # Restart under the correct shell, and then maybe $ECHO will work.
+      exec /bin/sh "$0" --no-reexec ${1+"$@"}
+    fi
+  fi
+
+  # Find the directory that this script lives in.
+  thisdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'`
+  test "x$thisdir" = "x$file" && thisdir=.
+
+  # Follow symbolic links until we get to the real thisdir.
+  file=`ls -ld "$file" | /bin/sed -n 's/.*-> //p'`
+  while test -n "$file"; do
+    destdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'`
+
+    # If there was a directory component, then change thisdir.
+    if test "x$destdir" != "x$file"; then
+      case "$destdir" in
+      [\\/]* | [A-Za-z]:[\\/]*) thisdir="$destdir" ;;
+      *) thisdir="$thisdir/$destdir" ;;
+      esac
+    fi
+
+    file=`$ECHO "X$file" | $Xsed -e 's%^.*/%%'`
+    file=`ls -ld "$thisdir/$file" | /bin/sed -n 's/.*-> //p'`
+  done
+
+
+  # Usually 'no', except on cygwin/mingw when embedded into
+  # the cwrapper.
+  WRAPPER_SCRIPT_BELONGS_IN_OBJDIR=no
+  if test "$WRAPPER_SCRIPT_BELONGS_IN_OBJDIR" = "yes"; then
+    # special case for '.'
+    if test "$thisdir" = "."; then
+      thisdir=`pwd`
+    fi
+    # remove .libs from thisdir
+    case "$thisdir" in
+    *[\\/].libs ) thisdir=`$ECHO "X$thisdir" | $Xsed -e 's%[\\/][^\\/]*$%%'` ;;
+    .libs )   thisdir=. ;;
+    esac
+  fi
+
+  # Try to get the absolute directory name.
+  absdir=`cd "$thisdir" && pwd`
+  test -n "$absdir" && thisdir="$absdir"
+
+  program='cmph_hash_map_test'
+  progdir="$thisdir/.libs"
+
+
+  if test -f "$progdir/$program"; then
+    # Add our own library path to LD_LIBRARY_PATH
+    LD_LIBRARY_PATH="/home/davi/cvs/cmph.git/src/.libs:$LD_LIBRARY_PATH"
+
+    # Some systems cannot cope with colon-terminated LD_LIBRARY_PATH
+    # The second colon is a workaround for a bug in BeOS R4 sed
+    LD_LIBRARY_PATH=`$ECHO "X$LD_LIBRARY_PATH" | $Xsed -e 's/::*$//'`
+
+    export LD_LIBRARY_PATH
+
+    if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then
+      # Run the actual program with our arguments.
+
+      exec "$progdir/$program" ${1+"$@"}
+
+      $ECHO "$0: cannot exec $program $*" 1>&2
+      exit 1
+    fi
+  else
+    # The program doesn't exist.
+    $ECHO "$0: error: \`$progdir/$program' does not exist" 1>&2
+    $ECHO "This script is just a wrapper for $program." 1>&2
+    echo "See the libtool documentation for more information." 1>&2
+    exit 1
+  fi
+fi

cxxmph/cmph_hash_map_test.cc

@@ -0,0 +1,19 @@
+#include "cmph_hash_map.h"
+
+#include <iostream>
+
+int main(int argc, char** argv) {
+  cmph_hash_map<int, int> h;
+  h.insert(std::make_pair(-1,-1));
+  for (cmph_hash_map<int, int>::const_iterator it = h.begin(); it != h.end(); ++it) {
+    std::cout << it->first << " -> " << it->second << std::endl;
+  }
+  std::cout << "Search -1 gives " << h.find(-1)->second << std::endl;
+  for (int i = 0; i < 1000; ++i) h.insert(std::make_pair(i, i));
+  for (int j = 0; j < 1000; ++j) {
+    for (int i = 1000; i > 0; --i) {
+      h.find(i - 1);
+      // std::cout << "Search " << i - 1 << " gives " << h.find(i - 1)->second << std::endl;
+    }
+  }
+}

cxxmph/mphtable.cc

@@ -0,0 +1,37 @@
+#include <numerical_limits>
+
+template <int n, int mask = 1 << 7> struct bitcount {
+  enum { value = (n & mask ? 1:0) + bitcount<n, mask >> 1>::value };
+};
+template <int n> struct bitcount<n, 0> { enum { value = 0 }; };
+
+template <int n, int current, int mask = 1 << 8> struct bitposition {
+  enum 
+
+template <int index = 0, typename op> class CompileTimeByteTable {
+ public:
+  CompileTimeByteTable : current(op<index>::value) { }
+  int operator[] (int i) { return *(&current + i); }
+private:
+  unsigned char current;
+  CompileTimeByteTable<next> next;
+};
+
+static CompileTimeByteTable<256, bitcount> BitcountTable;
+
+
+#define mix(a,b,c) \
+{ \
+        a -= b; a -= c; a ^= (c>>13); \
+        b -= c; b -= a; b ^= (a<<8); \
+        c -= a; c -= b; c ^= (b>>13); \
+        a -= b; a -= c; a ^= (c>>12);  \
+        b -= c; b -= a; b ^= (a<<16); \
+        c -= a; c -= b; c ^= (b>>5); \
+        a -= b; a -= c; a ^= (c>>3);  \
+        b -= c; b -= a; b ^= (a<<10); \
+        c -= a; c -= b; c ^= (b>>15); \
+}
+
+
+static const int kMaskStepSelectTable = std::limit<char>::max;

cxxmph/mphtable.h

@@ -0,0 +1,299 @@
+
+template <class Key>
+class MPHTable {
+ public:
+  typedef Key key_type;
+
+  MPHTable(cmph_t* mphf);
+  ~MPHTable();
+
+  template <class Iterator>
+  bool reset(Iterator begin, Iterator end);
+
+  cmph_uint32 index(const key_type& x) const;
+
+ private:
+  MPHTable();
+  cmph_t* mphf;
+
+  // Generates three hash values for k in a single pass.
+  static hash_vector(cmph_uint32 seed, const char* k, cmph_uint32 keylen, cmph_uint32* hashes) ;
+};
+
+unsigned int MPHTable::index(const key_type& key) const {
+  cmph_uint32 keylen = sizeof(key);
+  chd_ph_data_t* chd = reinterpret_cast<chd_ph_data_t*>(mphf->data);
+  cmph_uint32 hl[3];
+  cmph_uint32 dispatch, position;
+  cmph_uint32 probe0, probe1;
+  cmph_uint32 f,g,h;
+  hash_vector(chd_ph->hl, reinterpret_cast<const char*>(&key), keylen, hl);
+  g = hl[0] % chd_ph->nbuckets;
+  f = hl[1] % chd_ph->n;
+  g = hl[2] % (chd_ph->n - 1) + 1;
+  dispatch = compressed_seq_query(chd_ph->cs, g);
+  probe0_num = disp % chd_ph->n;
+  probe1_num = disp / chd_ph->n;
+  position = (cmph_uint32)((f + ((cmph_uint64)h)*probe0 + probe1) % chd_ph->n);
+  return position;
+}
+
+void MPHTable::hash_vector(cmph_uint32 seed, const char* k, cmph_uint32 keylen,
+                           cmph_uint32* hashes) {
+  cmph_uint32 len = keylen, length = keylen;
+  hashes[0] = hashes[1] = 0x9e3779b9;  // the golden ratio; an arbitrary value
+  hashes[2] = seed;  // the previous hash value - seed in our case 
+  // consume most of the key
+  while (len >= 12) {
+    hashes[0] += ((cmph_uint32)k[0] +((cmph_uint32)k[1]<<8) +((cmph_uint32)k[2]<<16) +((cmph_uint32)k[3]<<24));
+    hashes[1] += ((cmph_uint32)k[4] +((cmph_uint32)k[5]<<8) +((cmph_uint32)k[6]<<16) +((cmph_uint32)k[7]<<24));
+    hashes[2] += ((cmph_uint32)k[8] +((cmph_uint32)k[9]<<8) +((cmph_uint32)k[10]<<16)+((cmph_uint32)k[11]<<24));
+    mix(hashes[0],hashes[1],hashes[2]);
+    k += 12; len -= 12;
+  }
+  // Consumes the remaining 11 bytes
+  hashes[2]  += length;
+  switch(len) { // all the case statements fall through
+    case 11: 
+      hashes[2] +=((cmph_uint32)k[10]<<24);
+    case 10: 
+      hashes[2] +=((cmph_uint32)k[9]<<16);
+    case 9: 
+      hashes[2] +=((cmph_uint32)k[8]<<8);
+    /* the first byte of hashes[2] is reserved for the length */
+    case 8: 
+      hashes[1] +=((cmph_uint32)k[7]<<24);
+    case 7: 
+      hashes[1] +=((cmph_uint32)k[6]<<16);
+    case 6: 
+      hashes[1] +=((cmph_uint32)k[5]<<8);
+    case 5:
+      hashes[1] +=(cmph_uint8) k[4];
+    case 4: 
+      hashes[0] +=((cmph_uint32)k[3]<<24);
+    case 3: 
+      hashes[0] +=((cmph_uint32)k[2]<<16);
+    case 2: 
+      hashes[0] +=((cmph_uint32)k[1]<<8);
+    case 1: 
+      hashes[0] +=(cmph_uint8)k[0];
+    /* case 0: nothing left to add */
+  }
+  mix(hashes[0],hashes[1],hashes[2]);
+}
+
+cmph_uint32 MPHTable::select_query(select_t* sel, cmph_uint32 one_idx) {
+  cmph_uint8* bits_table = sel->bits_vec;
+  cmph_uint32* select_table = sel->select_table;
+
+  cmph_uint32 vec_bit_idx, vec_byte_idx;
+  cmph_uint32 part_sum, old_part_sum;
+
+  vec_bit_idx = select_table[one_idx >> NBITS_STEP_SELECT_TABLE]; // one_idx >> NBITS_STEP_SELECT_TABLE = one_idx/STEP_SELECT_TABLE
+  vec_byte_idx = vec_bit_idx >> 3; // vec_bit_idx / 8
+
+  one_idx &= MASK_STEP_SELECT_TABLE; // one_idx %= STEP_SELECT_TABLE == one_idx &= MASK_STEP_SELECT_TABLE
+  one_idx += rank_lookup_table[bits_table[vec_byte_idx] & ((1 << (vec_bit_idx & 0x7)) - 1)];
+  part_sum = 0;
+	
+  do {
+    old_part_sum = part_sum; 
+    part_sum += rank_lookup_table[bits_table[vec_byte_idx]];
+    vec_byte_idx++;
+  } while (part_sum <= one_idx);
+  return select_lookup_table[bits_table[vec_byte_idx - 1]][one_idx - old_part_sum] + ((vec_byte_idx-1) << 3);
+}
+
+/*
+rank_lookup_table[i] simply gives the number of bits set to one in the byte of value i.
+For example if i = 01010101 in binary then we have :
+rank_lookup_table[i] = 4
+*/
+
+static cmph_uint8 rank_lookup_table[256] ={
+   0 , 1 , 1 , 2 , 1 , 2 , 2 , 3 , 1 , 2 , 2 , 3 , 2 , 3 , 3 , 4
+,  1 , 2 , 2 , 3 , 2 , 3 , 3 , 4 , 2 , 3 , 3 , 4 , 3 , 4 , 4 , 5
+,  1 , 2 , 2 , 3 , 2 , 3 , 3 , 4 , 2 , 3 , 3 , 4 , 3 , 4 , 4 , 5
+,  2 , 3 , 3 , 4 , 3 , 4 , 4 , 5 , 3 , 4 , 4 , 5 , 4 , 5 , 5 , 6
+,  1 , 2 , 2 , 3 , 2 , 3 , 3 , 4 , 2 , 3 , 3 , 4 , 3 , 4 , 4 , 5
+,  2 , 3 , 3 , 4 , 3 , 4 , 4 , 5 , 3 , 4 , 4 , 5 , 4 , 5 , 5 , 6
+,  2 , 3 , 3 , 4 , 3 , 4 , 4 , 5 , 3 , 4 , 4 , 5 , 4 , 5 , 5 , 6
+,  3 , 4 , 4 , 5 , 4 , 5 , 5 , 6 , 4 , 5 , 5 , 6 , 5 , 6 , 6 , 7
+,  1 , 2 , 2 , 3 , 2 , 3 , 3 , 4 , 2 , 3 , 3 , 4 , 3 , 4 , 4 , 5
+,  2 , 3 , 3 , 4 , 3 , 4 , 4 , 5 , 3 , 4 , 4 , 5 , 4 , 5 , 5 , 6
+,  2 , 3 , 3 , 4 , 3 , 4 , 4 , 5 , 3 , 4 , 4 , 5 , 4 , 5 , 5 , 6
+,  3 , 4 , 4 , 5 , 4 , 5 , 5 , 6 , 4 , 5 , 5 , 6 , 5 , 6 , 6 , 7
+,  2 , 3 , 3 , 4 , 3 , 4 , 4 , 5 , 3 , 4 , 4 , 5 , 4 , 5 , 5 , 6
+,  3 , 4 , 4 , 5 , 4 , 5 , 5 , 6 , 4 , 5 , 5 , 6 , 5 , 6 , 6 , 7
+,  3 , 4 , 4 , 5 , 4 , 5 , 5 , 6 , 4 , 5 , 5 , 6 , 5 , 6 , 6 , 7
+,  4 , 5 , 5 , 6 , 5 , 6 , 6 , 7 , 5 , 6 , 6 , 7 , 6 , 7 , 7 , 8 
+ };
+
+/*
+select_lookup_table[i][j] simply gives the index of the j'th bit set to one in the byte of value i.
+For example if i=01010101 in binary then we have :
+select_lookup_table[i][0] = 0,   the first bit set to one is at position 0
+select_lookup_table[i][1] = 2,   the second bit set to one is at position 2
+select_lookup_table[i][2] = 4,   the third bit set to one is at position 4
+select_lookup_table[i][3] = 6,   the fourth bit set to one is at position 6
+select_lookup_table[i][4] = 255, there is no more than 4 bits set to one in i, so we return escape value 255. 
+*/
+static cmph_uint8 select_lookup_table[256][8]={
+{ 255 , 255 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 255 , 255 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 255 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 255 , 255 , 255 , 255 , 255 , 255 } ,
+{ 2 , 255 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 255 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 255 , 255 , 255 , 255 , 255 } ,
+{ 3 , 255 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 255 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 255 , 255 , 255 , 255 , 255 } ,
+{ 2 , 3 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 255 , 255 , 255 , 255 } ,
+{ 4 , 255 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 4 , 255 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 4 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 4 , 255 , 255 , 255 , 255 , 255 } ,
+{ 2 , 4 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 4 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 4 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 4 , 255 , 255 , 255 , 255 } ,
+{ 3 , 4 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 4 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 4 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 4 , 255 , 255 , 255 , 255 } ,
+{ 2 , 3 , 4 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 4 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 4 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 4 , 255 , 255 , 255 } ,
+{ 5 , 255 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 5 , 255 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 5 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 5 , 255 , 255 , 255 , 255 , 255 } ,
+{ 2 , 5 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 5 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 5 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 5 , 255 , 255 , 255 , 255 } ,
+{ 3 , 5 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 5 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 5 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 5 , 255 , 255 , 255 , 255 } ,
+{ 2 , 3 , 5 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 5 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 5 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 5 , 255 , 255 , 255 } ,
+{ 4 , 5 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 4 , 5 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 4 , 5 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 4 , 5 , 255 , 255 , 255 , 255 } ,
+{ 2 , 4 , 5 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 4 , 5 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 4 , 5 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 4 , 5 , 255 , 255 , 255 } ,
+{ 3 , 4 , 5 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 4 , 5 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 4 , 5 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 4 , 5 , 255 , 255 , 255 } ,
+{ 2 , 3 , 4 , 5 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 4 , 5 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 4 , 5 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 4 , 5 , 255 , 255 } ,
+{ 6 , 255 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 6 , 255 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 6 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 6 , 255 , 255 , 255 , 255 , 255 } ,
+{ 2 , 6 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 6 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 6 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 6 , 255 , 255 , 255 , 255 } ,
+{ 3 , 6 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 6 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 6 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 6 , 255 , 255 , 255 , 255 } ,
+{ 2 , 3 , 6 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 6 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 6 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 6 , 255 , 255 , 255 } ,
+{ 4 , 6 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 4 , 6 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 4 , 6 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 4 , 6 , 255 , 255 , 255 , 255 } ,
+{ 2 , 4 , 6 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 4 , 6 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 4 , 6 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 4 , 6 , 255 , 255 , 255 } ,
+{ 3 , 4 , 6 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 4 , 6 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 4 , 6 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 4 , 6 , 255 , 255 , 255 } ,
+{ 2 , 3 , 4 , 6 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 4 , 6 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 4 , 6 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 4 , 6 , 255 , 255 } ,
+{ 5 , 6 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 5 , 6 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 5 , 6 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 5 , 6 , 255 , 255 , 255 , 255 } ,
+{ 2 , 5 , 6 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 5 , 6 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 5 , 6 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 5 , 6 , 255 , 255 , 255 } ,
+{ 3 , 5 , 6 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 5 , 6 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 5 , 6 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 5 , 6 , 255 , 255 , 255 } ,
+{ 2 , 3 , 5 , 6 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 5 , 6 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 5 , 6 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 5 , 6 , 255 , 255 } ,
+{ 4 , 5 , 6 , 255 , 255 , 255 , 255 , 255 } , { 0 , 4 , 5 , 6 , 255 , 255 , 255 , 255 } ,
+{ 1 , 4 , 5 , 6 , 255 , 255 , 255 , 255 } , { 0 , 1 , 4 , 5 , 6 , 255 , 255 , 255 } ,
+{ 2 , 4 , 5 , 6 , 255 , 255 , 255 , 255 } , { 0 , 2 , 4 , 5 , 6 , 255 , 255 , 255 } ,
+{ 1 , 2 , 4 , 5 , 6 , 255 , 255 , 255 } , { 0 , 1 , 2 , 4 , 5 , 6 , 255 , 255 } ,
+{ 3 , 4 , 5 , 6 , 255 , 255 , 255 , 255 } , { 0 , 3 , 4 , 5 , 6 , 255 , 255 , 255 } ,
+{ 1 , 3 , 4 , 5 , 6 , 255 , 255 , 255 } , { 0 , 1 , 3 , 4 , 5 , 6 , 255 , 255 } ,
+{ 2 , 3 , 4 , 5 , 6 , 255 , 255 , 255 } , { 0 , 2 , 3 , 4 , 5 , 6 , 255 , 255 } ,
+{ 1 , 2 , 3 , 4 , 5 , 6 , 255 , 255 } , { 0 , 1 , 2 , 3 , 4 , 5 , 6 , 255 } ,
+{ 7 , 255 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 7 , 255 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 7 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 7 , 255 , 255 , 255 , 255 , 255 } ,
+{ 2 , 7 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 7 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 7 , 255 , 255 , 255 , 255 } ,
+{ 3 , 7 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 7 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 7 , 255 , 255 , 255 , 255 } ,
+{ 2 , 3 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 7 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 7 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 7 , 255 , 255 , 255 } ,
+{ 4 , 7 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 4 , 7 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 4 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 4 , 7 , 255 , 255 , 255 , 255 } ,
+{ 2 , 4 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 4 , 7 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 4 , 7 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 4 , 7 , 255 , 255 , 255 } ,
+{ 3 , 4 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 4 , 7 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 4 , 7 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 4 , 7 , 255 , 255 , 255 } ,
+{ 2 , 3 , 4 , 7 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 4 , 7 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 4 , 7 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 4 , 7 , 255 , 255 } ,
+{ 5 , 7 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 5 , 7 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 5 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 5 , 7 , 255 , 255 , 255 , 255 } ,
+{ 2 , 5 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 5 , 7 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 5 , 7 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 5 , 7 , 255 , 255 , 255 } ,
+{ 3 , 5 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 5 , 7 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 5 , 7 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 5 , 7 , 255 , 255 , 255 } ,
+{ 2 , 3 , 5 , 7 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 5 , 7 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 5 , 7 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 5 , 7 , 255 , 255 } ,
+{ 4 , 5 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 4 , 5 , 7 , 255 , 255 , 255 , 255 } ,
+{ 1 , 4 , 5 , 7 , 255 , 255 , 255 , 255 } , { 0 , 1 , 4 , 5 , 7 , 255 , 255 , 255 } ,
+{ 2 , 4 , 5 , 7 , 255 , 255 , 255 , 255 } , { 0 , 2 , 4 , 5 , 7 , 255 , 255 , 255 } ,
+{ 1 , 2 , 4 , 5 , 7 , 255 , 255 , 255 } , { 0 , 1 , 2 , 4 , 5 , 7 , 255 , 255 } ,
+{ 3 , 4 , 5 , 7 , 255 , 255 , 255 , 255 } , { 0 , 3 , 4 , 5 , 7 , 255 , 255 , 255 } ,
+{ 1 , 3 , 4 , 5 , 7 , 255 , 255 , 255 } , { 0 , 1 , 3 , 4 , 5 , 7 , 255 , 255 } ,
+{ 2 , 3 , 4 , 5 , 7 , 255 , 255 , 255 } , { 0 , 2 , 3 , 4 , 5 , 7 , 255 , 255 } ,
+{ 1 , 2 , 3 , 4 , 5 , 7 , 255 , 255 } , { 0 , 1 , 2 , 3 , 4 , 5 , 7 , 255 } ,
+{ 6 , 7 , 255 , 255 , 255 , 255 , 255 , 255 } , { 0 , 6 , 7 , 255 , 255 , 255 , 255 , 255 } ,
+{ 1 , 6 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 1 , 6 , 7 , 255 , 255 , 255 , 255 } ,
+{ 2 , 6 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 2 , 6 , 7 , 255 , 255 , 255 , 255 } ,
+{ 1 , 2 , 6 , 7 , 255 , 255 , 255 , 255 } , { 0 , 1 , 2 , 6 , 7 , 255 , 255 , 255 } ,
+{ 3 , 6 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 3 , 6 , 7 , 255 , 255 , 255 , 255 } ,
+{ 1 , 3 , 6 , 7 , 255 , 255 , 255 , 255 } , { 0 , 1 , 3 , 6 , 7 , 255 , 255 , 255 } ,
+{ 2 , 3 , 6 , 7 , 255 , 255 , 255 , 255 } , { 0 , 2 , 3 , 6 , 7 , 255 , 255 , 255 } ,
+{ 1 , 2 , 3 , 6 , 7 , 255 , 255 , 255 } , { 0 , 1 , 2 , 3 , 6 , 7 , 255 , 255 } ,
+{ 4 , 6 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 4 , 6 , 7 , 255 , 255 , 255 , 255 } ,
+{ 1 , 4 , 6 , 7 , 255 , 255 , 255 , 255 } , { 0 , 1 , 4 , 6 , 7 , 255 , 255 , 255 } ,
+{ 2 , 4 , 6 , 7 , 255 , 255 , 255 , 255 } , { 0 , 2 , 4 , 6 , 7 , 255 , 255 , 255 } ,
+{ 1 , 2 , 4 , 6 , 7 , 255 , 255 , 255 } , { 0 , 1 , 2 , 4 , 6 , 7 , 255 , 255 } ,
+{ 3 , 4 , 6 , 7 , 255 , 255 , 255 , 255 } , { 0 , 3 , 4 , 6 , 7 , 255 , 255 , 255 } ,
+{ 1 , 3 , 4 , 6 , 7 , 255 , 255 , 255 } , { 0 , 1 , 3 , 4 , 6 , 7 , 255 , 255 } ,
+{ 2 , 3 , 4 , 6 , 7 , 255 , 255 , 255 } , { 0 , 2 , 3 , 4 , 6 , 7 , 255 , 255 } ,
+{ 1 , 2 , 3 , 4 , 6 , 7 , 255 , 255 } , { 0 , 1 , 2 , 3 , 4 , 6 , 7 , 255 } ,
+{ 5 , 6 , 7 , 255 , 255 , 255 , 255 , 255 } , { 0 , 5 , 6 , 7 , 255 , 255 , 255 , 255 } ,
+{ 1 , 5 , 6 , 7 , 255 , 255 , 255 , 255 } , { 0 , 1 , 5 , 6 , 7 , 255 , 255 , 255 } ,
+{ 2 , 5 , 6 , 7 , 255 , 255 , 255 , 255 } , { 0 , 2 , 5 , 6 , 7 , 255 , 255 , 255 } ,
+{ 1 , 2 , 5 , 6 , 7 , 255 , 255 , 255 } , { 0 , 1 , 2 , 5 , 6 , 7 , 255 , 255 } ,
+{ 3 , 5 , 6 , 7 , 255 , 255 , 255 , 255 } , { 0 , 3 , 5 , 6 , 7 , 255 , 255 , 255 } ,
+{ 1 , 3 , 5 , 6 , 7 , 255 , 255 , 255 } , { 0 , 1 , 3 , 5 , 6 , 7 , 255 , 255 } ,
+{ 2 , 3 , 5 , 6 , 7 , 255 , 255 , 255 } , { 0 , 2 , 3 , 5 , 6 , 7 , 255 , 255 } ,
+{ 1 , 2 , 3 , 5 , 6 , 7 , 255 , 255 } , { 0 , 1 , 2 , 3 , 5 , 6 , 7 , 255 } ,
+{ 4 , 5 , 6 , 7 , 255 , 255 , 255 , 255 } , { 0 , 4 , 5 , 6 , 7 , 255 , 255 , 255 } ,
+{ 1 , 4 , 5 , 6 , 7 , 255 , 255 , 255 } , { 0 , 1 , 4 , 5 , 6 , 7 , 255 , 255 } ,
+{ 2 , 4 , 5 , 6 , 7 , 255 , 255 , 255 } , { 0 , 2 , 4 , 5 , 6 , 7 , 255 , 255 } ,
+{ 1 , 2 , 4 , 5 , 6 , 7 , 255 , 255 } , { 0 , 1 , 2 , 4 , 5 , 6 , 7 , 255 } ,
+{ 3 , 4 , 5 , 6 , 7 , 255 , 255 , 255 } , { 0 , 3 , 4 , 5 , 6 , 7 , 255 , 255 } ,
+{ 1 , 3 , 4 , 5 , 6 , 7 , 255 , 255 } , { 0 , 1 , 3 , 4 , 5 , 6 , 7 , 255 } ,
+{ 2 , 3 , 4 , 5 , 6 , 7 , 255 , 255 } , { 0 , 2 , 3 , 4 , 5 , 6 , 7 , 255 } ,
+{ 1 , 2 , 3 , 4 , 5 , 6 , 7 , 255 } , { 0 , 1 , 2 , 3 , 4 , 5 , 6 , 7 } };
+
+cmph_uint32 MPHTable::compressed_seq_query(compressed_seq_t * cs, cmph_uint32 idx)
+{
+  cmph_uint32 enc_idx, enc_length;
+  cmph_uint32 rems_mask;
+  cmph_uint32 stored_value;
+  cmph_uint32 sel_res;
+
+  assert(idx < cs->n); // FABIANO ADDED
+
+  rems_mask = (1U << cs->rem_r) - 1U;
+	
+  if(idx == 0) {
+    enc_idx = 0;
+    sel_res = select_query(&cs->sel, idx);
+  } else {
+    sel_res = select_query(&cs->sel, idx - 1);
+    enc_idx = (sel_res - (idx - 1)) << cs->rem_r;
+    enc_idx += get_bits_value(cs->length_rems, idx-1, cs->rem_r, rems_mask);
+    sel_res = select_next_query(&cs->sel, sel_res);
+  };
+
+  enc_length = (sel_res - idx) << cs->rem_r;
+  enc_length += get_bits_value(cs->length_rems, idx, cs->rem_r, rems_mask);
+  enc_length -= enc_idx;
+  if(enc_length == 0) return 0;
+
+  stored_value = get_bits_at_pos(cs->store_table, enc_idx, enc_length);
+  return stored_value + ((1U << enc_length) - 1U);
+};

src/Makefile

@@ -1,8 +1,9 @@
-# Makefile.in generated by automake 1.10 from Makefile.am.
+# Makefile.in generated by automake 1.11.1 from Makefile.am.
 # src/Makefile.  Generated from Makefile.in by configure.
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008, 2009  Free Software Foundation,
+# Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -18,8 +19,9 @@
 
 
 pkgdatadir = $(datadir)/cmph
-pkglibdir = $(libdir)/cmph
 pkgincludedir = $(includedir)/cmph
+pkglibdir = $(libdir)/cmph
+pkglibexecdir = $(libexecdir)/cmph
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
@@ -32,8 +34,8 @@ POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-build_triplet = i386-apple-darwin9.6.0
+build_triplet = i686-pc-linux-gnu
-host_triplet = i386-apple-darwin9.6.0
+host_triplet = i686-pc-linux-gnu
 bin_PROGRAMS = cmph$(EXEEXT)
 subdir = src
 DIST_COMMON = $(include_HEADERS) $(srcdir)/Makefile.am \
@@ -46,15 +48,30 @@ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
 mkinstalldirs = $(install_sh) -d
 CONFIG_HEADER = $(top_builddir)/config.h
 CONFIG_CLEAN_FILES =
+CONFIG_CLEAN_VPATH_FILES =
 am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`;
 am__vpath_adj = case $$p in \
     $(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \
     *) f=$$p;; \
   esac;
-am__strip_dir = `echo $$p | sed -e 's|^.*/||'`;
+am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`;
+am__install_max = 40
+am__nobase_strip_setup = \
+  srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'`
+am__nobase_strip = \
+  for p in $$list; do echo "$$p"; done | sed -e "s|$$srcdirstrip/||"
+am__nobase_list = $(am__nobase_strip_setup); \
+  for p in $$list; do echo "$$p $$p"; done | \
+  sed "s| $$srcdirstrip/| |;"' / .*\//!s/ .*/ ./; s,\( .*\)/[^/]*$$,\1,' | \
+  $(AWK) 'BEGIN { files["."] = "" } { files[$$2] = files[$$2] " " $$1; \
+    if (++n[$$2] == $(am__install_max)) \
+      { print $$2, files[$$2]; n[$$2] = 0; files[$$2] = "" } } \
+    END { for (dir in files) print dir, files[dir] }'
+am__base_list = \
+  sed '$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;s/\n/ /g' | \
+  sed '$$!N;$$!N;$$!N;$$!N;s/\n/ /g'
 am__installdirs = "$(DESTDIR)$(libdir)" "$(DESTDIR)$(bindir)" \
 	"$(DESTDIR)$(includedir)"
-libLTLIBRARIES_INSTALL = $(INSTALL)
 LTLIBRARIES = $(lib_LTLIBRARIES)
 libcmph_la_LIBADD =
 am_libcmph_la_OBJECTS = hash.lo jenkins_hash.lo vstack.lo vqueue.lo \
@@ -66,7 +83,6 @@ libcmph_la_OBJECTS = $(am_libcmph_la_OBJECTS)
 libcmph_la_LINK = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) \
 	$(LIBTOOLFLAGS) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
 	$(libcmph_la_LDFLAGS) $(LDFLAGS) -o $@
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
 PROGRAMS = $(bin_PROGRAMS)
 am_cmph_OBJECTS = main.$(OBJEXT) wingetopt.$(OBJEXT)
 cmph_OBJECTS = $(am_cmph_OBJECTS)
@@ -74,6 +90,7 @@ cmph_DEPENDENCIES = libcmph.la
 DEFAULT_INCLUDES = -I. -I$(top_builddir)
 depcomp = $(SHELL) $(top_srcdir)/depcomp
 am__depfiles_maybe = depfiles
+am__mv = mv -f
 COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
 	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
 LTCOMPILE = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
@@ -85,21 +102,20 @@ LINK = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
 	$(LDFLAGS) -o $@
 SOURCES = $(libcmph_la_SOURCES) $(cmph_SOURCES)
 DIST_SOURCES = $(libcmph_la_SOURCES) $(cmph_SOURCES)
-includeHEADERS_INSTALL = $(INSTALL_HEADER)
 HEADERS = $(include_HEADERS)
 ETAGS = etags
 CTAGS = ctags
 DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-ACLOCAL = ${SHELL} /Users/davi/vc/cmph/missing --run aclocal-1.10
+ACLOCAL = ${SHELL} /home/davi/cvs/cmph.git/missing --run aclocal-1.11
-AMTAR = ${SHELL} /Users/davi/vc/cmph/missing --run tar
+AMTAR = ${SHELL} /home/davi/cvs/cmph.git/missing --run tar
 AR = ar
-AUTOCONF = ${SHELL} /Users/davi/vc/cmph/missing --run autoconf
+AUTOCONF = ${SHELL} /home/davi/cvs/cmph.git/missing --run autoconf
-AUTOHEADER = ${SHELL} /Users/davi/vc/cmph/missing --run autoheader
+AUTOHEADER = ${SHELL} /home/davi/cvs/cmph.git/missing --run autoheader
-AUTOMAKE = ${SHELL} /Users/davi/vc/cmph/missing --run automake-1.10
+AUTOMAKE = ${SHELL} /home/davi/cvs/cmph.git/missing --run automake-1.11
-AWK = awk
+AWK = gawk
 CC = gcc
 CCDEPMODE = depmode=gcc3
-CFLAGS = -g -O2 
+CFLAGS = -g -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64
 CPP = gcc -E
 CPPFLAGS = 
 CXX = g++
@@ -109,84 +125,95 @@ CXXFLAGS = -g -O2
 CYGPATH_W = echo
 DEFS = -DHAVE_CONFIG_H
 DEPDIR = .deps
-ECHO = echo
+DSYMUTIL = 
+DUMPBIN = 
 ECHO_C = 
 ECHO_N = -n
 ECHO_T = 
-EGREP = /usr/bin/grep -E
+EGREP = /bin/grep -E
 EXEEXT = 
-F77 = 
+FGREP = /bin/grep -F
-FFLAGS = 
 GETCONF = getconf
-GREP = /usr/bin/grep
+GREP = /bin/grep
 INSTALL = /usr/bin/install -c
 INSTALL_DATA = ${INSTALL} -m 644
 INSTALL_PROGRAM = ${INSTALL}
 INSTALL_SCRIPT = ${INSTALL}
 INSTALL_STRIP_PROGRAM = $(install_sh) -c -s
-LDFLAGS =   
+LD = /usr/i686-pc-linux-gnu/bin/ld
+LDFLAGS = -lm  
+LIBM = -lm
 LIBOBJS = 
 LIBS =  
 LIBTOOL = $(SHELL) $(top_builddir)/libtool
+LIPO = 
 LN_S = ln -s
 LTLIBOBJS = 
-MAKEINFO = ${SHELL} /Users/davi/vc/cmph/missing --run makeinfo
+MAKEINFO = ${SHELL} /home/davi/cvs/cmph.git/missing --run makeinfo
-MKDIR_P = .././install-sh -c -d
+MKDIR_P = /bin/mkdir -p
+NM = /usr/bin/nm -B
+NMEDIT = 
+OBJDUMP = objdump
 OBJEXT = o
+OTOOL = 
+OTOOL64 = 
 PACKAGE = cmph
 PACKAGE_BUGREPORT = 
 PACKAGE_NAME = 
 PACKAGE_STRING = 
 PACKAGE_TARNAME = 
+PACKAGE_URL = 
 PACKAGE_VERSION = 
 PATH_SEPARATOR = :
 RANLIB = ranlib
+SED = /bin/sed
 SET_MAKE = 
 SHELL = /bin/sh
 STRIP = strip
 VERSION = 0.9
-abs_builddir = /Users/davi/vc/cmph/src
+abs_builddir = /home/davi/cvs/cmph.git/src
-abs_srcdir = /Users/davi/vc/cmph/src
+abs_srcdir = /home/davi/cvs/cmph.git/src
-abs_top_builddir = /Users/davi/vc/cmph
+abs_top_builddir = /home/davi/cvs/cmph.git
-abs_top_srcdir = /Users/davi/vc/cmph
+abs_top_srcdir = /home/davi/cvs/cmph.git
 ac_ct_CC = gcc
 ac_ct_CXX = g++
-ac_ct_F77 = 
+ac_ct_DUMPBIN = 
 am__include = include
 am__leading_dot = .
 am__quote = 
 am__tar = ${AMTAR} chof - "$$tardir"
 am__untar = ${AMTAR} xf -
 bindir = ${exec_prefix}/bin
-build = i386-apple-darwin9.6.0
+build = i686-pc-linux-gnu
 build_alias = 
-build_cpu = i386
+build_cpu = i686
-build_os = darwin9.6.0
+build_os = linux-gnu
-build_vendor = apple
+build_vendor = pc
 builddir = .
 datadir = ${datarootdir}
 datarootdir = ${prefix}/share
 docdir = ${datarootdir}/doc/${PACKAGE}
 dvidir = ${docdir}
 exec_prefix = ${prefix}
-host = i386-apple-darwin9.6.0
+host = i686-pc-linux-gnu
 host_alias = 
-host_cpu = i386
+host_cpu = i686
-host_os = darwin9.6.0
+host_os = linux-gnu
-host_vendor = apple
+host_vendor = pc
 htmldir = ${docdir}
 includedir = ${prefix}/include
 infodir = ${datarootdir}/info
-install_sh = $(SHELL) /Users/davi/vc/cmph/install-sh
+install_sh = ${SHELL} /home/davi/cvs/cmph.git/install-sh
 libdir = ${exec_prefix}/lib
 libexecdir = ${exec_prefix}/libexec
 localedir = ${datarootdir}/locale
 localstatedir = ${prefix}/var
+lt_ECHO = echo
 mandir = ${datarootdir}/man
-mkdir_p = $(top_builddir)/./install-sh -c -d
+mkdir_p = /bin/mkdir -p
 oldincludedir = /usr/include
 pdfdir = ${docdir}
-prefix = /usr/local
+prefix = /usr
 program_transform_name = s,x,x,
 psdir = ${docdir}
 sbindir = ${exec_prefix}/sbin
@@ -194,10 +221,11 @@ sharedstatedir = ${prefix}/com
 srcdir = .
 sysconfdir = ${prefix}/etc
 target_alias = 
+top_build_prefix = ../
 top_builddir = ..
 top_srcdir = ..
 lib_LTLIBRARIES = libcmph.la
-include_HEADERS = cmph.h cmph_types.h cmph_time.h
+include_HEADERS = cmph.h cmph_types.h cmph_time.h chd_ph.h
 libcmph_la_SOURCES = hash.h hash.c \
 		      jenkins_hash.h jenkins_hash.c\
 		      hash_state.h debug.h \
@@ -233,13 +261,13 @@ $(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
 	@for dep in $?; do \
 	  case '$(am__configure_deps)' in \
 	    *$$dep*) \
-	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+	      ( cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh ) \
-		&& exit 0; \
+	        && { if test -f $@; then exit 0; else break; fi; }; \
 	      exit 1;; \
 	  esac; \
 	done; \
 	echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu src/Makefile'; \
-	cd $(top_srcdir) && \
+	$(am__cd) $(top_srcdir) && \
 	  $(AUTOMAKE) --gnu src/Makefile
 .PRECIOUS: Makefile
 Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
@@ -258,23 +286,28 @@ $(top_srcdir)/configure:  $(am__configure_deps)
 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 $(ACLOCAL_M4):  $(am__aclocal_m4_deps)
 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(am__aclocal_m4_deps):
 install-libLTLIBRARIES: $(lib_LTLIBRARIES)
 	@$(NORMAL_INSTALL)
 	test -z "$(libdir)" || $(MKDIR_P) "$(DESTDIR)$(libdir)"
-	@list='$(lib_LTLIBRARIES)'; for p in $$list; do \
+	@list='$(lib_LTLIBRARIES)'; test -n "$(libdir)" || list=; \
+	list2=; for p in $$list; do \
 	  if test -f $$p; then \
-	    f=$(am__strip_dir) \
+	    list2="$$list2 $$p"; \
-	    echo " $(LIBTOOL) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) '$$p' '$(DESTDIR)$(libdir)/$$f'"; \
-	    $(LIBTOOL) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) "$$p" "$(DESTDIR)$(libdir)/$$f"; \
 	  else :; fi; \
-	done
+	done; \
+	test -z "$$list2" || { \
+	  echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL) $(INSTALL_STRIP_FLAG) $$list2 '$(DESTDIR)$(libdir)'"; \
+	  $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL) $(INSTALL_STRIP_FLAG) $$list2 "$(DESTDIR)$(libdir)"; \
+	}
 
 uninstall-libLTLIBRARIES:
 	@$(NORMAL_UNINSTALL)
-	@list='$(lib_LTLIBRARIES)'; for p in $$list; do \
+	@list='$(lib_LTLIBRARIES)'; test -n "$(libdir)" || list=; \
-	  p=$(am__strip_dir) \
+	for p in $$list; do \
-	  echo " $(LIBTOOL) --mode=uninstall rm -f '$(DESTDIR)$(libdir)/$$p'"; \
+	  $(am__strip_dir) \
-	  $(LIBTOOL) --mode=uninstall rm -f "$(DESTDIR)$(libdir)/$$p"; \
+	  echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f '$(DESTDIR)$(libdir)/$$f'"; \
+	  $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f "$(DESTDIR)$(libdir)/$$f"; \
 	done
 
 clean-libLTLIBRARIES:
@@ -290,31 +323,46 @@ libcmph.la: $(libcmph_la_OBJECTS) $(libcmph_la_DEPENDENCIES)
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
 	test -z "$(bindir)" || $(MKDIR_P) "$(DESTDIR)$(bindir)"
-	@list='$(bin_PROGRAMS)'; for p in $$list; do \
+	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
-	  p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
+	for p in $$list; do echo "$$p $$p"; done | \
-	  if test -f $$p \
+	sed 's/$(EXEEXT)$$//' | \
-	     || test -f $$p1 \
+	while read p p1; do if test -f $$p || test -f $$p1; \
-	  ; then \
+	  then echo "$$p"; echo "$$p"; else :; fi; \
-	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
+	done | \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	sed -e 'p;s,.*/,,;n;h' -e 's|.*|.|' \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
+	    -e 'p;x;s,.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/' | \
-	  else :; fi; \
+	sed 'N;N;N;s,\n, ,g' | \
-	done
+	$(AWK) 'BEGIN { files["."] = ""; dirs["."] = 1 } \
+	  { d=$$3; if (dirs[d] != 1) { print "d", d; dirs[d] = 1 } \
+	    if ($$2 == $$4) files[d] = files[d] " " $$1; \
+	    else { print "f", $$3 "/" $$4, $$1; } } \
+	  END { for (d in files) print "f", d, files[d] }' | \
+	while read type dir files; do \
+	    if test "$$dir" = .; then dir=; else dir=/$$dir; fi; \
+	    test -z "$$files" || { \
+	    echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL_PROGRAM) $$files '$(DESTDIR)$(bindir)$$dir'"; \
+	    $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL_PROGRAM) $$files "$(DESTDIR)$(bindir)$$dir" || exit $$?; \
+	    } \
+	; done
 
 uninstall-binPROGRAMS:
 	@$(NORMAL_UNINSTALL)
-	@list='$(bin_PROGRAMS)'; for p in $$list; do \
+	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
-	  f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
+	files=`for p in $$list; do echo "$$p"; done | \
-	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  sed -e 'h;s,^.*/,,;s/$(EXEEXT)$$//;$(transform)' \
-	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
+	      -e 's/$$/$(EXEEXT)/' `; \
-	done
+	test -n "$$list" || exit 0; \
+	echo " ( cd '$(DESTDIR)$(bindir)' && rm -f" $$files ")"; \
+	cd "$(DESTDIR)$(bindir)" && rm -f $$files
 
 clean-binPROGRAMS:
-	@list='$(bin_PROGRAMS)'; for p in $$list; do \
+	@list='$(bin_PROGRAMS)'; test -n "$$list" || exit 0; \
-	  f=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
+	echo " rm -f" $$list; \
-	  echo " rm -f $$p $$f"; \
+	rm -f $$list || exit $$?; \
-	  rm -f $$p $$f ; \
+	test -n "$(EXEEXT)" || exit 0; \
-	done
+	list=`for p in $$list; do echo "$$p"; done | sed 's/$(EXEEXT)$$//'`; \
+	echo " rm -f" $$list; \
+	rm -f $$list
 cmph$(EXEEXT): $(cmph_OBJECTS) $(cmph_DEPENDENCIES) 
 	@rm -f cmph$(EXEEXT)
 	$(LINK) $(cmph_OBJECTS) $(cmph_LDADD) $(LIBS)
@@ -353,21 +401,21 @@ include ./$(DEPDIR)/wingetopt.Po
 
 .c.o:
 	$(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
-	mv -f $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
+	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
 #	source='$<' object='$@' libtool=no \
 #	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
 #	$(COMPILE) -c $<
 
 .c.obj:
 	$(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ `$(CYGPATH_W) '$<'`
-	mv -f $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
+	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
 #	source='$<' object='$@' libtool=no \
 #	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
 #	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
 	$(LTCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
-	mv -f $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Plo
+	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Plo
 #	source='$<' object='$@' libtool=yes \
 #	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
 #	$(LTCOMPILE) -c -o $@ $<
@@ -380,65 +428,72 @@ clean-libtool:
 install-includeHEADERS: $(include_HEADERS)
 	@$(NORMAL_INSTALL)
 	test -z "$(includedir)" || $(MKDIR_P) "$(DESTDIR)$(includedir)"
-	@list='$(include_HEADERS)'; for p in $$list; do \
+	@list='$(include_HEADERS)'; test -n "$(includedir)" || list=; \
+	for p in $$list; do \
 	  if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
-	  f=$(am__strip_dir) \
+	  echo "$$d$$p"; \
-	  echo " $(includeHEADERS_INSTALL) '$$d$$p' '$(DESTDIR)$(includedir)/$$f'"; \
+	done | $(am__base_list) | \
-	  $(includeHEADERS_INSTALL) "$$d$$p" "$(DESTDIR)$(includedir)/$$f"; \
+	while read files; do \
+	  echo " $(INSTALL_HEADER) $$files '$(DESTDIR)$(includedir)'"; \
+	  $(INSTALL_HEADER) $$files "$(DESTDIR)$(includedir)" || exit $$?; \
 	done
 
 uninstall-includeHEADERS:
 	@$(NORMAL_UNINSTALL)
-	@list='$(include_HEADERS)'; for p in $$list; do \
+	@list='$(include_HEADERS)'; test -n "$(includedir)" || list=; \
-	  f=$(am__strip_dir) \
+	files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
-	  echo " rm -f '$(DESTDIR)$(includedir)/$$f'"; \
+	test -n "$$files" || exit 0; \
-	  rm -f "$(DESTDIR)$(includedir)/$$f"; \
+	echo " ( cd '$(DESTDIR)$(includedir)' && rm -f" $$files ")"; \
-	done
+	cd "$(DESTDIR)$(includedir)" && rm -f $$files
 
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
-	       END { for (i in files) print i; }'`; \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	mkid -fID $$unique
 tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
-	tags=; \
+	set x; \
 	here=`pwd`; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
-	       END { for (i in files) print i; }'`; \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
-	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	shift; \
+	if test -z "$(ETAGS_ARGS)$$*$$unique"; then :; else \
 	  test -n "$$unique" || unique=$$empty_fix; \
+	  if test $$# -gt 0; then \
 	    $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
-	    $$tags $$unique; \
+	      "$$@" $$unique; \
+	  else \
+	    $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	      $$unique; \
+	  fi; \
 	fi
 ctags: CTAGS
 CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
-	tags=; \
-	here=`pwd`; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
-	       END { for (i in files) print i; }'`; \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
-	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	test -z "$(CTAGS_ARGS)$$unique" \
 	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
-	     $$tags $$unique
+	     $$unique
 
 GTAGS:
 	here=`$(am__cd) $(top_builddir) && pwd` \
-	  && cd $(top_srcdir) \
+	  && $(am__cd) $(top_srcdir) \
-	  && gtags -i $(GTAGS_ARGS) $$here
+	  && gtags -i $(GTAGS_ARGS) "$$here"
 
 distclean-tags:
 	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
@@ -459,13 +514,17 @@ distdir: $(DISTFILES)
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  if test -d $$d/$$file; then \
 	    dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
-	    if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
+	    if test -d "$(distdir)/$$file"; then \
-	      cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \
+	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
 	    fi; \
-	    cp -pR $$d/$$file $(distdir)$$dir || exit 1; \
+	    if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
+	      cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
+	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+	    fi; \
+	    cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
 	  else \
-	    test -f $(distdir)/$$file \
+	    test -f "$(distdir)/$$file" \
-	    || cp -p $$d/$$file $(distdir)/$$file \
+	    || cp -p $$d/$$file "$(distdir)/$$file" \
 	    || exit 1; \
 	  fi; \
 	done
@@ -498,6 +557,7 @@ clean-generic:
 
 distclean-generic:
 	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+	-test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
 
 maintainer-clean-generic:
 	@echo "This command is intended for maintainers to use"
@@ -519,6 +579,8 @@ dvi-am:
 
 html: html-am
 
+html-am:
+
 info: info-am
 
 info-am:
@@ -527,18 +589,28 @@ install-data-am: install-includeHEADERS
 
 install-dvi: install-dvi-am
 
+install-dvi-am:
+
 install-exec-am: install-binPROGRAMS install-libLTLIBRARIES
 
 install-html: install-html-am
 
+install-html-am:
+
 install-info: install-info-am
 
+install-info-am:
+
 install-man:
 
 install-pdf: install-pdf-am
 
+install-pdf-am:
+
 install-ps: install-ps-am
 
+install-ps-am:
+
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
@@ -580,6 +652,7 @@ uninstall-am: uninstall-binPROGRAMS uninstall-includeHEADERS \
 	tags uninstall uninstall-am uninstall-binPROGRAMS \
 	uninstall-includeHEADERS uninstall-libLTLIBRARIES
 
+
 # Tell versions [3.59,3.63) of GNU make to not export all variables.
 # Otherwise a system limit (for SysV at least) may be exceeded.
 .NOEXPORT:

src/Makefile.am

@@ -1,6 +1,6 @@
 bin_PROGRAMS = cmph
 lib_LTLIBRARIES = libcmph.la
-include_HEADERS = cmph.h cmph_types.h cmph_time.h
+include_HEADERS = cmph.h cmph_types.h cmph_time.h chd_ph.h
 libcmph_la_SOURCES =  hash.h hash.c \
 		      jenkins_hash.h jenkins_hash.c\
 		      hash_state.h debug.h \

src/Makefile.in

@@ -1,8 +1,9 @@
-# Makefile.in generated by automake 1.10 from Makefile.am.
+# Makefile.in generated by automake 1.11.1 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008, 2009  Free Software Foundation,
+# Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -18,8 +19,9 @@
 
 VPATH = @srcdir@
 pkgdatadir = $(datadir)/@PACKAGE@
-pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
+pkglibdir = $(libdir)/@PACKAGE@
+pkglibexecdir = $(libexecdir)/@PACKAGE@
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
@@ -46,15 +48,30 @@ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
 mkinstalldirs = $(install_sh) -d
 CONFIG_HEADER = $(top_builddir)/config.h
 CONFIG_CLEAN_FILES =
+CONFIG_CLEAN_VPATH_FILES =
 am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`;
 am__vpath_adj = case $$p in \
     $(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \
     *) f=$$p;; \
   esac;
-am__strip_dir = `echo $$p | sed -e 's|^.*/||'`;
+am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`;
+am__install_max = 40
+am__nobase_strip_setup = \
+  srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'`
+am__nobase_strip = \
+  for p in $$list; do echo "$$p"; done | sed -e "s|$$srcdirstrip/||"
+am__nobase_list = $(am__nobase_strip_setup); \
+  for p in $$list; do echo "$$p $$p"; done | \
+  sed "s| $$srcdirstrip/| |;"' / .*\//!s/ .*/ ./; s,\( .*\)/[^/]*$$,\1,' | \
+  $(AWK) 'BEGIN { files["."] = "" } { files[$$2] = files[$$2] " " $$1; \
+    if (++n[$$2] == $(am__install_max)) \
+      { print $$2, files[$$2]; n[$$2] = 0; files[$$2] = "" } } \
+    END { for (dir in files) print dir, files[dir] }'
+am__base_list = \
+  sed '$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;s/\n/ /g' | \
+  sed '$$!N;$$!N;$$!N;$$!N;s/\n/ /g'
 am__installdirs = "$(DESTDIR)$(libdir)" "$(DESTDIR)$(bindir)" \
 	"$(DESTDIR)$(includedir)"
-libLTLIBRARIES_INSTALL = $(INSTALL)
 LTLIBRARIES = $(lib_LTLIBRARIES)
 libcmph_la_LIBADD =
 am_libcmph_la_OBJECTS = hash.lo jenkins_hash.lo vstack.lo vqueue.lo \
@@ -66,14 +83,14 @@ libcmph_la_OBJECTS = $(am_libcmph_la_OBJECTS)
 libcmph_la_LINK = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) \
 	$(LIBTOOLFLAGS) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
 	$(libcmph_la_LDFLAGS) $(LDFLAGS) -o $@
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
 PROGRAMS = $(bin_PROGRAMS)
 am_cmph_OBJECTS = main.$(OBJEXT) wingetopt.$(OBJEXT)
 cmph_OBJECTS = $(am_cmph_OBJECTS)
 cmph_DEPENDENCIES = libcmph.la
-DEFAULT_INCLUDES = -I. -I$(top_builddir)@am__isrc@
+DEFAULT_INCLUDES = -I.@am__isrc@ -I$(top_builddir)
 depcomp = $(SHELL) $(top_srcdir)/depcomp
 am__depfiles_maybe = depfiles
+am__mv = mv -f
 COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
 	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
 LTCOMPILE = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
@@ -85,7 +102,6 @@ LINK = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
 	$(LDFLAGS) -o $@
 SOURCES = $(libcmph_la_SOURCES) $(cmph_SOURCES)
 DIST_SOURCES = $(libcmph_la_SOURCES) $(cmph_SOURCES)
-includeHEADERS_INSTALL = $(INSTALL_HEADER)
 HEADERS = $(include_HEADERS)
 ETAGS = etags
 CTAGS = ctags
@@ -109,14 +125,14 @@ CXXFLAGS = @CXXFLAGS@
 CYGPATH_W = @CYGPATH_W@
 DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-ECHO = @ECHO@
+DSYMUTIL = @DSYMUTIL@
+DUMPBIN = @DUMPBIN@
 ECHO_C = @ECHO_C@
 ECHO_N = @ECHO_N@
 ECHO_T = @ECHO_T@
 EGREP = @EGREP@
 EXEEXT = @EXEEXT@
-F77 = @F77@
+FGREP = @FGREP@
-FFLAGS = @FFLAGS@
 GETCONF = @GETCONF@
 GREP = @GREP@
 INSTALL = @INSTALL@
@@ -124,23 +140,33 @@ INSTALL_DATA = @INSTALL_DATA@
 INSTALL_PROGRAM = @INSTALL_PROGRAM@
 INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
+LD = @LD@
 LDFLAGS = @LDFLAGS@
+LIBM = @LIBM@
 LIBOBJS = @LIBOBJS@
 LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
+LIPO = @LIPO@
 LN_S = @LN_S@
 LTLIBOBJS = @LTLIBOBJS@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
+NM = @NM@
+NMEDIT = @NMEDIT@
+OBJDUMP = @OBJDUMP@
 OBJEXT = @OBJEXT@
+OTOOL = @OTOOL@
+OTOOL64 = @OTOOL64@
 PACKAGE = @PACKAGE@
 PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
 PACKAGE_NAME = @PACKAGE_NAME@
 PACKAGE_STRING = @PACKAGE_STRING@
 PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_URL = @PACKAGE_URL@
 PACKAGE_VERSION = @PACKAGE_VERSION@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 RANLIB = @RANLIB@
+SED = @SED@
 SET_MAKE = @SET_MAKE@
 SHELL = @SHELL@
 STRIP = @STRIP@
@@ -151,7 +177,7 @@ abs_top_builddir = @abs_top_builddir@
 abs_top_srcdir = @abs_top_srcdir@
 ac_ct_CC = @ac_ct_CC@
 ac_ct_CXX = @ac_ct_CXX@
-ac_ct_F77 = @ac_ct_F77@
+ac_ct_DUMPBIN = @ac_ct_DUMPBIN@
 am__include = @am__include@
 am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
@@ -182,6 +208,7 @@ libdir = @libdir@
 libexecdir = @libexecdir@
 localedir = @localedir@
 localstatedir = @localstatedir@
+lt_ECHO = @lt_ECHO@
 mandir = @mandir@
 mkdir_p = @mkdir_p@
 oldincludedir = @oldincludedir@
@@ -194,10 +221,11 @@ sharedstatedir = @sharedstatedir@
 srcdir = @srcdir@
 sysconfdir = @sysconfdir@
 target_alias = @target_alias@
+top_build_prefix = @top_build_prefix@
 top_builddir = @top_builddir@
 top_srcdir = @top_srcdir@
 lib_LTLIBRARIES = libcmph.la
-include_HEADERS = cmph.h cmph_types.h cmph_time.h
+include_HEADERS = cmph.h cmph_types.h cmph_time.h chd_ph.h
 libcmph_la_SOURCES = hash.h hash.c \
 		      jenkins_hash.h jenkins_hash.c\
 		      hash_state.h debug.h \
@@ -233,13 +261,13 @@ $(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
 	@for dep in $?; do \
 	  case '$(am__configure_deps)' in \
 	    *$$dep*) \
-	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+	      ( cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh ) \
-		&& exit 0; \
+	        && { if test -f $@; then exit 0; else break; fi; }; \
 	      exit 1;; \
 	  esac; \
 	done; \
 	echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu src/Makefile'; \
-	cd $(top_srcdir) && \
+	$(am__cd) $(top_srcdir) && \
 	  $(AUTOMAKE) --gnu src/Makefile
 .PRECIOUS: Makefile
 Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
@@ -258,23 +286,28 @@ $(top_srcdir)/configure:  $(am__configure_deps)
 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 $(ACLOCAL_M4):  $(am__aclocal_m4_deps)
 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(am__aclocal_m4_deps):
 install-libLTLIBRARIES: $(lib_LTLIBRARIES)
 	@$(NORMAL_INSTALL)
 	test -z "$(libdir)" || $(MKDIR_P) "$(DESTDIR)$(libdir)"
-	@list='$(lib_LTLIBRARIES)'; for p in $$list; do \
+	@list='$(lib_LTLIBRARIES)'; test -n "$(libdir)" || list=; \
+	list2=; for p in $$list; do \
 	  if test -f $$p; then \
-	    f=$(am__strip_dir) \
+	    list2="$$list2 $$p"; \
-	    echo " $(LIBTOOL) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) '$$p' '$(DESTDIR)$(libdir)/$$f'"; \
-	    $(LIBTOOL) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) "$$p" "$(DESTDIR)$(libdir)/$$f"; \
 	  else :; fi; \
-	done
+	done; \
+	test -z "$$list2" || { \
+	  echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL) $(INSTALL_STRIP_FLAG) $$list2 '$(DESTDIR)$(libdir)'"; \
+	  $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL) $(INSTALL_STRIP_FLAG) $$list2 "$(DESTDIR)$(libdir)"; \
+	}
 
 uninstall-libLTLIBRARIES:
 	@$(NORMAL_UNINSTALL)
-	@list='$(lib_LTLIBRARIES)'; for p in $$list; do \
+	@list='$(lib_LTLIBRARIES)'; test -n "$(libdir)" || list=; \
-	  p=$(am__strip_dir) \
+	for p in $$list; do \
-	  echo " $(LIBTOOL) --mode=uninstall rm -f '$(DESTDIR)$(libdir)/$$p'"; \
+	  $(am__strip_dir) \
-	  $(LIBTOOL) --mode=uninstall rm -f "$(DESTDIR)$(libdir)/$$p"; \
+	  echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f '$(DESTDIR)$(libdir)/$$f'"; \
+	  $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f "$(DESTDIR)$(libdir)/$$f"; \
 	done
 
 clean-libLTLIBRARIES:
@@ -290,31 +323,46 @@ libcmph.la: $(libcmph_la_OBJECTS) $(libcmph_la_DEPENDENCIES)
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
 	test -z "$(bindir)" || $(MKDIR_P) "$(DESTDIR)$(bindir)"
-	@list='$(bin_PROGRAMS)'; for p in $$list; do \
+	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
-	  p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
+	for p in $$list; do echo "$$p $$p"; done | \
-	  if test -f $$p \
+	sed 's/$(EXEEXT)$$//' | \
-	     || test -f $$p1 \
+	while read p p1; do if test -f $$p || test -f $$p1; \
-	  ; then \
+	  then echo "$$p"; echo "$$p"; else :; fi; \
-	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
+	done | \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	sed -e 'p;s,.*/,,;n;h' -e 's|.*|.|' \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
+	    -e 'p;x;s,.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/' | \
-	  else :; fi; \
+	sed 'N;N;N;s,\n, ,g' | \
-	done
+	$(AWK) 'BEGIN { files["."] = ""; dirs["."] = 1 } \
+	  { d=$$3; if (dirs[d] != 1) { print "d", d; dirs[d] = 1 } \
+	    if ($$2 == $$4) files[d] = files[d] " " $$1; \
+	    else { print "f", $$3 "/" $$4, $$1; } } \
+	  END { for (d in files) print "f", d, files[d] }' | \
+	while read type dir files; do \
+	    if test "$$dir" = .; then dir=; else dir=/$$dir; fi; \
+	    test -z "$$files" || { \
+	    echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL_PROGRAM) $$files '$(DESTDIR)$(bindir)$$dir'"; \
+	    $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL_PROGRAM) $$files "$(DESTDIR)$(bindir)$$dir" || exit $$?; \
+	    } \
+	; done
 
 uninstall-binPROGRAMS:
 	@$(NORMAL_UNINSTALL)
-	@list='$(bin_PROGRAMS)'; for p in $$list; do \
+	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
-	  f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
+	files=`for p in $$list; do echo "$$p"; done | \
-	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  sed -e 'h;s,^.*/,,;s/$(EXEEXT)$$//;$(transform)' \
-	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
+	      -e 's/$$/$(EXEEXT)/' `; \
-	done
+	test -n "$$list" || exit 0; \
+	echo " ( cd '$(DESTDIR)$(bindir)' && rm -f" $$files ")"; \
+	cd "$(DESTDIR)$(bindir)" && rm -f $$files
 
 clean-binPROGRAMS:
-	@list='$(bin_PROGRAMS)'; for p in $$list; do \
+	@list='$(bin_PROGRAMS)'; test -n "$$list" || exit 0; \
-	  f=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
+	echo " rm -f" $$list; \
-	  echo " rm -f $$p $$f"; \
+	rm -f $$list || exit $$?; \
-	  rm -f $$p $$f ; \
+	test -n "$(EXEEXT)" || exit 0; \
-	done
+	list=`for p in $$list; do echo "$$p"; done | sed 's/$(EXEEXT)$$//'`; \
+	echo " rm -f" $$list; \
+	rm -f $$list
 cmph$(EXEEXT): $(cmph_OBJECTS) $(cmph_DEPENDENCIES) 
 	@rm -f cmph$(EXEEXT)
 	$(LINK) $(cmph_OBJECTS) $(cmph_LDADD) $(LIBS)
@@ -353,21 +401,21 @@ distclean-compile:
 
 .c.o:
 @am__fastdepCC_TRUE@	$(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
-@am__fastdepCC_TRUE@	mv -f $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
+@am__fastdepCC_TRUE@	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
 @AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
 @AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
 @am__fastdepCC_FALSE@	$(COMPILE) -c $<
 
 .c.obj:
 @am__fastdepCC_TRUE@	$(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ `$(CYGPATH_W) '$<'`
-@am__fastdepCC_TRUE@	mv -f $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
+@am__fastdepCC_TRUE@	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
 @AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
 @AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
 @am__fastdepCC_FALSE@	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
 @am__fastdepCC_TRUE@	$(LTCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
-@am__fastdepCC_TRUE@	mv -f $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Plo
+@am__fastdepCC_TRUE@	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Plo
 @AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
 @AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
 @am__fastdepCC_FALSE@	$(LTCOMPILE) -c -o $@ $<
@@ -380,65 +428,72 @@ clean-libtool:
 install-includeHEADERS: $(include_HEADERS)
 	@$(NORMAL_INSTALL)
 	test -z "$(includedir)" || $(MKDIR_P) "$(DESTDIR)$(includedir)"
-	@list='$(include_HEADERS)'; for p in $$list; do \
+	@list='$(include_HEADERS)'; test -n "$(includedir)" || list=; \
+	for p in $$list; do \
 	  if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
-	  f=$(am__strip_dir) \
+	  echo "$$d$$p"; \
-	  echo " $(includeHEADERS_INSTALL) '$$d$$p' '$(DESTDIR)$(includedir)/$$f'"; \
+	done | $(am__base_list) | \
-	  $(includeHEADERS_INSTALL) "$$d$$p" "$(DESTDIR)$(includedir)/$$f"; \
+	while read files; do \
+	  echo " $(INSTALL_HEADER) $$files '$(DESTDIR)$(includedir)'"; \
+	  $(INSTALL_HEADER) $$files "$(DESTDIR)$(includedir)" || exit $$?; \
 	done
 
 uninstall-includeHEADERS:
 	@$(NORMAL_UNINSTALL)
-	@list='$(include_HEADERS)'; for p in $$list; do \
+	@list='$(include_HEADERS)'; test -n "$(includedir)" || list=; \
-	  f=$(am__strip_dir) \
+	files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
-	  echo " rm -f '$(DESTDIR)$(includedir)/$$f'"; \
+	test -n "$$files" || exit 0; \
-	  rm -f "$(DESTDIR)$(includedir)/$$f"; \
+	echo " ( cd '$(DESTDIR)$(includedir)' && rm -f" $$files ")"; \
-	done
+	cd "$(DESTDIR)$(includedir)" && rm -f $$files
 
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
-	       END { for (i in files) print i; }'`; \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	mkid -fID $$unique
 tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
-	tags=; \
+	set x; \
 	here=`pwd`; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
-	       END { for (i in files) print i; }'`; \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
-	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	shift; \
+	if test -z "$(ETAGS_ARGS)$$*$$unique"; then :; else \
 	  test -n "$$unique" || unique=$$empty_fix; \
+	  if test $$# -gt 0; then \
 	    $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
-	    $$tags $$unique; \
+	      "$$@" $$unique; \
+	  else \
+	    $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	      $$unique; \
+	  fi; \
 	fi
 ctags: CTAGS
 CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
-	tags=; \
-	here=`pwd`; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
-	       END { for (i in files) print i; }'`; \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
-	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	test -z "$(CTAGS_ARGS)$$unique" \
 	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
-	     $$tags $$unique
+	     $$unique
 
 GTAGS:
 	here=`$(am__cd) $(top_builddir) && pwd` \
-	  && cd $(top_srcdir) \
+	  && $(am__cd) $(top_srcdir) \
-	  && gtags -i $(GTAGS_ARGS) $$here
+	  && gtags -i $(GTAGS_ARGS) "$$here"
 
 distclean-tags:
 	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
@@ -459,13 +514,17 @@ distdir: $(DISTFILES)
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  if test -d $$d/$$file; then \
 	    dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
-	    if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
+	    if test -d "$(distdir)/$$file"; then \
-	      cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \
+	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
 	    fi; \
-	    cp -pR $$d/$$file $(distdir)$$dir || exit 1; \
+	    if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
+	      cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
+	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+	    fi; \
+	    cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
 	  else \
-	    test -f $(distdir)/$$file \
+	    test -f "$(distdir)/$$file" \
-	    || cp -p $$d/$$file $(distdir)/$$file \
+	    || cp -p $$d/$$file "$(distdir)/$$file" \
 	    || exit 1; \
 	  fi; \
 	done
@@ -498,6 +557,7 @@ clean-generic:
 
 distclean-generic:
 	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+	-test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
 
 maintainer-clean-generic:
 	@echo "This command is intended for maintainers to use"
@@ -519,6 +579,8 @@ dvi-am:
 
 html: html-am
 
+html-am:
+
 info: info-am
 
 info-am:
@@ -527,18 +589,28 @@ install-data-am: install-includeHEADERS
 
 install-dvi: install-dvi-am
 
+install-dvi-am:
+
 install-exec-am: install-binPROGRAMS install-libLTLIBRARIES
 
 install-html: install-html-am
 
+install-html-am:
+
 install-info: install-info-am
 
+install-info-am:
+
 install-man:
 
 install-pdf: install-pdf-am
 
+install-pdf-am:
+
 install-ps: install-ps-am
 
+install-ps-am:
+
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
@@ -580,6 +652,7 @@ uninstall-am: uninstall-binPROGRAMS uninstall-includeHEADERS \
 	tags uninstall uninstall-am uninstall-binPROGRAMS \
 	uninstall-includeHEADERS uninstall-libLTLIBRARIES
 
+
 # Tell versions [3.59,3.63) of GNU make to not export all variables.
 # Otherwise a system limit (for SysV at least) may be exceeded.
 .NOEXPORT:

src/chd.c

@@ -63,6 +63,7 @@ void chd_config_set_keys_per_bin(cmph_config_t *mph, cmph_uint32 keys_per_bin)
 
 cmph_t *chd_new(cmph_config_t *mph, double c)
 {
+	DEBUGP("Creating new chd");
 	cmph_t *mphf = NULL;
 	chd_data_t *chdf = NULL;
 	chd_config_data_t *chd = (chd_config_data_t *)mph->data;
@@ -203,7 +204,7 @@ int chd_dump(cmph_t *mphf, FILE *fd)
 	nbytes = fwrite(&data->packed_chd_phf_size, sizeof(cmph_uint32), (size_t)1, fd);
 	nbytes = fwrite(data->packed_chd_phf, data->packed_chd_phf_size, (size_t)1, fd);
 
-	DEBUGP("Dumping compressed rank structure with %u bytes to disk\n", buflen);
+	DEBUGP("Dumping compressed rank structure with %u bytes to disk\n", 1);
 	nbytes = fwrite(&data->packed_cr_size, sizeof(cmph_uint32), (size_t)1, fd);
 	nbytes = fwrite(data->packed_cr, data->packed_cr_size, (size_t)1, fd);
 	

src/chd_ph.c

@@ -625,7 +625,7 @@ cmph_t *chd_ph_new(cmph_config_t *mph, double c)
 	chd_ph_data_t *chd_phf = NULL;
 	chd_ph_config_data_t *chd_ph = (chd_ph_config_data_t *)mph->data;
 	
-	register double load_factor = c;
+	register double load_factor = 0.6;
 	register cmph_uint8 searching_success = 0;
 	register cmph_uint32 max_probes = 1 << 20; // default value for max_probes
 	register cmph_uint32 iterations = 100;
@@ -641,6 +641,7 @@ cmph_t *chd_ph_new(cmph_config_t *mph, double c)
 	double construction_time = 0.0;
 	ELAPSED_TIME_IN_SECONDS(&construction_time_begin);
 	#endif
+	c = load_factor;
 
 
 	chd_ph->m = mph->key_source->nkeys;