Commit 60cf85a4 corrected the handling of check-in for files where
the index version is non-normalized, i.e., contains CR-LF line endings.
However, it did so only for regular files, not executable files.
Bug: 561438
Change-Id: I372cc990c5efeb00315460f36459c0652d5d1e77
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
The change Ic0b974fa (c217d33, "Documentation/technical/reftable:
improve repo layout") defines a new repository layout, which was
agreed with the git-core mailing list.
It addresses the following problems:
* old git clients will not recognize reftable-based repositories, and
look at encompassing directories.
* Poorly written tools might write directly into
.git/refs/heads/BRANCH.
Since we consider JGit reftable as experimental (git-core doesn't
support it yet), we have no backward compatibility. If you created a
repository with reftable between mid-Nov 2019 and now, you can do the
following to convert:
mv .git/refs .git/reftable/tables.list
git config core.repositoryformatversion 1
git config extensions.refStorage reftable
Change-Id: I80df35b9d22a8ab893dcbe9fbd051d924788d6a5
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
The Java Language Specification recommends listing modifiers in
the following order:
1. Annotations
2. public
3. protected
4. private
5. abstract
6. static
7. final
8. transient
9. volatile
10. synchronized
11. native
12. strictfp
Not following this convention has no technical impact, but will reduce
the code's readability because most developers are used to the standard
order.
This was detected using SonarLint.
Change-Id: I9cddecb4f4234dae1021b677e915be23d349a380
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
The ReftableCompactor supported a byteLimit, but this is currently
unused. The FileReftableStack has a more sophisticated strategy that
amortizes compaction costs.
Rename min/maxUpdateIndex to reflogExpire{Min,Max}UpdateIndex to
reflect their purpose more accurately.
Since reflogs are generally pruned chronologically (oldest entries are
expired first), one can only prune entries on full compaction, so they
should not be set by default.
Rephrase the function Reader#minUpdateIndex and maxUpdateIndex. These
vars are documented to affect log entries, but semantically, they are
about ref entries. Since ref entries have their timestamps
delta-compressed, it is important for the min/maxUpdateIndex values to
be coherent between different tables.
The logical timestamps for log entries do not have to be coherent in
different tables, as the timestamps of a log entry is part of the key.
For example, a table written at update index 20 may contain a tombstone
log entry at timestamp 1.
Therefore, we set ReftableWriter's min/maxUpdateIndex from the merged
tables we are compacting, rather than from the compaction settings
(which should only control reflog expiry.)
The previous behavior could drop log entries erroneously, especially
in the presence of tombstone log entries. Unfortunately, testing this
properly requires both an API for adding log tombstones, and a more
refined API for controlling automatic compaction. Hence, no test.
Change-Id: I2f4eb7866f607fddd0629809e8e61f0b9097717f
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
The merged table contains handles to open files. A full compaction
causes those files to be closed, and so further lookups would fail
with EBADF.
Change-Id: I7bb74f7228ecc7fec9535b00e56a617a9c18e00e
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Commit 6216b0de changed the behavior of the setMirror(),
setCloneAllBranches(), and setBranchesToClone() operations. Before
that commit, these could be set and reset independently and only in
call() it would be determined what exactly to do. Since that commit,
the last of these calls would determine the operation. This means
that the sequence
cloneCommand.setCloneAllBranches(true);
cloneCommand.setBranchesToClone(/* some list of refs */);
would formerly do a "clone all" giving a fetch refspec with wildcards
+refs/heads/*:refs/remotes/origin/*
which picks up new upstream branches, whereas since commit 6216b0de
individual non-wildcard fetch refspecs would be generated and new
upstream branches would not be fetched anymore.
Undo this behavioral change. Make the operations independently settable
and resettable again, and determine the exact operation only in call():
mirror=true > cloneAll=true > specific refs, where ">" means "takes
precedence over", and if none is set assume cloneAll=true.
Note that mirror=true implies setBare(true).
Bug: 559796
Change-Id: I7162b60e99de5e3e512bf27ff4113f554c94f5a6
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
* stable-5.5:
Fix string format parameter for invalidRefAdvertisementLine
WindowCache: add metric for cached bytes per repository
pgm daemon: fallback to user and system config if no config specified
WindowCache: add option to use strong refs to reference ByteWindows
Replace usage of ArrayIndexOutOfBoundsException in treewalk
Add config constants for WindowCache configuration options
Change-Id: I73d16b53df02bf735c2431588143efe225a4b5b4
* stable-5.4:
Fix string format parameter for invalidRefAdvertisementLine
WindowCache: add metric for cached bytes per repository
pgm daemon: fallback to user and system config if no config specified
WindowCache: add option to use strong refs to reference ByteWindows
Replace usage of ArrayIndexOutOfBoundsException in treewalk
Add config constants for WindowCache configuration options
Change-Id: I76a62da98182f0c504b1ea8b7d37cecdf4eea7e0
* stable-5.3:
Fix string format parameter for invalidRefAdvertisementLine
WindowCache: add metric for cached bytes per repository
pgm daemon: fallback to user and system config if no config specified
WindowCache: add option to use strong refs to reference ByteWindows
Replace usage of ArrayIndexOutOfBoundsException in treewalk
Add config constants for WindowCache configuration options
Change-Id: I12002dbfed9dff14fc6d2df9787d92eab5b1fa78
* stable-5.2:
Fix string format parameter for invalidRefAdvertisementLine
WindowCache: add metric for cached bytes per repository
pgm daemon: fallback to user and system config if no config specified
WindowCache: add option to use strong refs to reference ByteWindows
Replace usage of ArrayIndexOutOfBoundsException in treewalk
Add config constants for WindowCache configuration options
Change-Id: I790098be00ff3f9b8278d54ae4fb7c11311816e9
* stable-5.1:
Fix string format parameter for invalidRefAdvertisementLine
WindowCache: add metric for cached bytes per repository
pgm daemon: fallback to user and system config if no config specified
WindowCache: add option to use strong refs to reference ByteWindows
Change-Id: I741059a1d0d5950ab5bc16ec70352655ee926a24
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Java GC evicts all SoftReferences when the used heap size comes close to
the maximum heap size. This means peaks in heap memory consumption can
flush the complete WindowCache which was observed to have negative
impact on performance of upload-pack in Gerrit.
Hence add a boolean option core.packedGitUseStrongRefs to allow using
strong references to reference packfile pages cached in the WindowCache.
If this option is set to true Java gc can no longer flush the
WindowCache to free memory if the used heap comes close to the maximum
heap size. On the other hand this provides more predictable performance.
Bug: 553573
Change-Id: I9de406293087ab0fa61130c8e0829775762ece8d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* stable-5.5:
Fix API problem filters
Fix unclosed resource warning in SmartOutputStream
JschConfigSessionFactory: fix boxing warning
SshSupport#runSshCommand: don't throw exception in finally block
Don't override already managed maven-compiler-plugin version
Remove unused import from CreateFileSnapshotBenchmark
Remove duplicate ignore_optional_problems entry in .classpath
Update maven-site-plugin used by benchmark module to 3.8.2
Add dependency to enable site generation for benchmark module
Ignore warnings for generated source code in
org.eclipse.jgit.benchmark
Fix MBean registration
Enhance WindowCache statistics
Change-Id: I11f9a387ac3dc7d22a4f2e70bb8d89169b4e9afe
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* stable-5.4:
Fix API problem filters
Fix unclosed resource warning in SmartOutputStream
JschConfigSessionFactory: fix boxing warning
SshSupport#runSshCommand: don't throw exception in finally block
Don't override already managed maven-compiler-plugin version
Remove unused import from CreateFileSnapshotBenchmark
Remove duplicate ignore_optional_problems entry in .classpath
Update maven-site-plugin used by benchmark module to 3.8.2
Add dependency to enable site generation for benchmark module
Ignore warnings for generated source code in
org.eclipse.jgit.benchmark
Fix MBean registration
Enhance WindowCache statistics
Change-Id: I78902d5feecb2c09134b64ec2f3b48b2c3bab37d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* stable-5.3:
Fix API problem filters
Fix unclosed resource warning in SmartOutputStream
JschConfigSessionFactory: fix boxing warning
SshSupport#runSshCommand: don't throw exception in finally block
Don't override already managed maven-compiler-plugin version
Remove unused import from CreateFileSnapshotBenchmark
Remove duplicate ignore_optional_problems entry in .classpath
Update maven-site-plugin used by benchmark module to 3.8.2
Add dependency to enable site generation for benchmark module
Ignore warnings for generated source code in
org.eclipse.jgit.benchmark
Fix MBean registration
Enhance WindowCache statistics
Change-Id: I1b560b36d169cfa02cc5450ad0fa0bd85f9f42d8
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* stable-5.2:
Fix API problem filters
Fix unclosed resource warning in SmartOutputStream
JschConfigSessionFactory: fix boxing warning
SshSupport#runSshCommand: don't throw exception in finally block
Don't override already managed maven-compiler-plugin version
Remove unused import from CreateFileSnapshotBenchmark
Remove duplicate ignore_optional_problems entry in .classpath
Update maven-site-plugin used by benchmark module to 3.8.2
Add dependency to enable site generation for benchmark module
Ignore warnings for generated source code in
org.eclipse.jgit.benchmark
Fix MBean registration
Enhance WindowCache statistics
Change-Id: I67a07d92718188bdf7f8a13b83e9f538ecf4b22f
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Add the following statistics
- cache hit count and hit ratio
- cache miss count and miss ratio
- count of successful and failed loads
- rate of failed loads
- load, eviction and request count
- average and total load time
Use LongAdder instead of AtomicLong to implement counters in order to
improve scalability.
Optionally expose these metrics via JMX, they are registered with the
platform MBean server if the config option jmx.WindowCacheStats = true
in the user or system level git config.
Bug: 553573
Change-Id: Ia2d5246ef69b9c2bd594a23934424bc5800774aa
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
- if a test can throw different exceptions declare it throws Exception
- fix code formatting
Change-Id: I55d63918f3163b31f2297d6217d5855108dd43b5
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Git log supports the exclude pathspec, which allows for excluding paths
from the log command. JGit only supports adding paths to the log
command. See the following StackOverflow question for details:
https://stackoverflow.com/questions/59143934/java-jgit-how-to-get-git-
commits-not-affecting-certain-directories
This commit adds an excludePath() method to the log command. It does not
yet support regex or glob wildcards.
Change-Id: I8cd59950b87850b55a15c7e2ea5470145c9aae28
Signed-off-by: John Tipper <john_tipper@hotmail.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Passing int as an argument to String.format causes a warning:
The expression of type int is boxed into Integer
Most of these are already suppressed, but there are a couple that are
not. Add suppressions for those.
For the existing ones, move the suppression scope from the method to
the actual usage. Where necessary extract the usage out to a local
variable.
Change-Id: I7a7ff6dec49467e4b5c58d27a231c74e6e1c5437
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
The reftable format supports fast inverse (SHA1 => ref) queries.
If the ref database does not support fast inverse queries, it may be
advantageous to build a complete SHA1 to ref map in advance for
multiple uses. To let applications decide, this function indicates
whether the inverse map is available.
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Change-Id: Idaf7e01075906972ec21332cade285289619c2b3
When a conflicting file was blamed, JGit would not identify lines
coming from the merge parents. The main cause for this was that
Blame and BlameCommand simply added the first DirCacheEntry found
for a file to its queue of candidates (blobs or commits) to consider.
In case of a conflict this typically is the merge base commit, and
comparing a auto-merged contents against that base would yield
incorrect results.
Such cases have to be handled specially. The candidate to be
considered by the blame must use the working tree contents, but
at the same time behave like a merge commit/candidate with HEAD
and the MERGE_HEADs as parents. Canonical git does something very
similar, see [1].
Implement that and add tests.
I first did this for the JGit pgm Blame command. When I then tried
to do the same in BlameCommand, I noticed that the latter also
included some fancy but incomplete CR-LF handling. In order to
be able to use the new BlameGenerator.prepareHead() also in
BlameCommand this CR-LF handling was also moved into BlameGenerator
and corrected in doing so.
(Just considering the git config settings was not good enough,
CR-LF behavior can also be influenced by .gitattributes, and even
by whether the file in the index has CR-LF. To correctly determine
CR-LF handling for check-in one needs to do a TreeWalk with at
least a FileTreeIterator and a DirCacheIterator.)
[1] https://github.com/git/git/blob/v2.22.0/blame.c#L174
Bug: 434330
Change-Id: I9d763dd6ba478b0b6ebf9456049d6301f478ef7c
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Forgot to add this in commit 989a927a5f
(checkNotAdvertisedWants: Be lazy convering Ref to RevCommit,
2019-11-20).
Change-Id: I5c1177ac60eabb3a71959bbad4537e076a901b7e
Signed-off-by: Jonathan Nieder <jrn@google.com>
Reftable-enabled repositories don't have a file called HEAD. Check for
reftable/ instead.
This fixes repository creation on reftable in Gerrit.
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Change-Id: I778c2be01d96aaf135affae4b457b5fe5b483bee
The checker is creating a new bitmap per branch leading to excessive
memory consumption. For the reachability check one bitmap with the
reachability of all branches aggregated is enough.
Build the reachability bitmap with a filter. The filter itself uses it
to emit only commits not reached before and the caller to check what
targets have been reached already.
BitmapCalculator is not required anymore.
Change-Id: Ic5c62f77fe0f188913215b7eaa51d849a9aae6a5
Signed-off-by: Ivan Frade <ifrade@google.com>
The ref points to an ObjectId that then is translated into a RevCommit.
This translation can be costly and with the incremental reachability
check is probably not needed for most of the elements.
Delay the translation from ObjectId to RevCommit to when it is needed.
Use Streams, that have the laziness built-in, all the way from Ref to
RevCommit.
This should reduce the latency for reachability checks over big sets of
references.
Change-Id: I28693087321b2beff3eaa1f3d2e7840ab0eedc6d
Signed-off-by: Ivan Frade <ifrade@google.com>
Preparatory change. Converting ObjectIds to RevCommits is potentially
expensive and in the incremental reachability check, it is probably not
required for all elements in the collection.
Pass a Stream to the reachability checker. In the follow up we make
the conversion from ObjectId to RevCommit in the stream (i.e. on
demand). This should reduce the latency of reachability checks over big
sets of references.
Change-Id: I9f310e331de5b0bf8de34143bd7dcd34316d2fba
Signed-off-by: Ivan Frade <ifrade@google.com>
Reftable is a binary, block-based storage format for the ref-database.
It provides several advantages over the traditional packed + loose
storage format:
* O(1) write performance, even for deletions and transactions.
* atomic updates to the ref database.
* O(log N) lookup and prefix scans
* free from restrictions imposed by the file system: it is
case-sensitive even on case-insensitive file systems, and has
no inherent limitations for directory/file conflicts
* prefix compression reduces space usage for repetitive ref names,
such as gerrit's refs/changes/xx/xxxxx format.
FileReftableDatabase is based on FileReftableStack, which does
compactions inline. This is simple, and has good median performance,
but every so often it will rewrite the entire ref database.
For testing, a FileReftableTest (mirroring RefUpdateTest) is added to
check for Reftable specific behavior. This must be done separately, as
reflogs have different semantics.
Add a reftable flavor of BatchRefUpdateTest.
Add a FileReftableStackTest to exercise compaction.
Add FileRepository#convertToReftable so existing testdata can be
reused.
CQ: 21007
Change-Id: I1837f268e91c6b446cb0155061727dbaccb714b8
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Prevent adding a null parent to a commit's parent array. Doing so
can cause NPEs later on.
Bug: 552160
Change-Id: Ib24b7b9b7b08e0b6f246006b4a4cade7eeb830b9
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
core.quotePath = false means that "bytes higher than 0x80 are not
considered "unusal" anymore"[1], i.e., they are not escaped. In
essence this preserves non-ASCII characters in path names in output.
Note that control characters and other special characters in the
ASCII range will still be escaped.
Add a new QuotedString.GIT_PATH_MINIMAL singleton implementing this.
Change the normal GIT_PATH algorithm to use bytes instead of characters
so it can be re-used. Provide a setter in DiffFormatter for the quoting
style so that an application can override the default, which is the
setting from the git config (and by default "true"). Use the new
QuotedString.GIT_PATH_MINIMAL when core.quotePath == false.
[1] https://git-scm.com/docs/git-config#Documentation/git-config.txt-corequotePath
Bug: 552467
Change-Id: Ifcb233e7d10676333bf42011e32d01a4e1138059
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
IndexDiff would apply ignore mode ALL from .gitmodules to all remaining
submodules, and would ignore other settings from .gitignore and always
apply the setting defined on the IndexDiff instead. Correct that.
In canonical git the ignore setting from .gitmodules can also be
overridden by .git/config.[1] Implement that override in SubmoduleWalk.
[1] https://git-scm.com/docs/gitmodules#Documentation/gitmodules.txt-submoduleltnamegtignore
Bug: 521613
Change-Id: I9199fd447e41c7838924856dce40678370b66395
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Move the BaseReceivePack implementation back into ReceivePack. This is a
backward-incompatible change. For example, BaseReceivePack.FirstLine no
longer exists and cannot be referenced. However, most of the code
should just work by replacing BaseReceivePack with ReceivePack.
Although this is an API change, it only affects callers using JGit as a
server, and there are very few of those in the wild.
Change-Id: I1ce92869435d5eebb7d671be44561e69c6233134
Signed-off-by: Masaya Suzuki <masayasuzuki@google.com>
* stable-5.5:
BaseReceivePack: Fix the format
Prepend hostname to subsection used to store file timestamp resolution
Store filesystem timestamp resolution in extra jgit config
SystemReader: extract updating config and its parents if outdated
Change-Id: Iecfddce8081303af29badcdcd3d72a0da50c964f
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
This avoids polluting hand-crafted user level config with
auto-configured options which might disturb in environments where
the user level config is replicated between different machines.
Add a jgit config as parent of the system level config. Persist
measured timestamp resolutions always in this jgit config and read it
via the user global config. This has the effect that auto-configured
timestamp resolution will be used by default and can be overridden in
either the system level or user level config.
Store the jgit config under the XDG_CONFIG_HOME directory following the
XDG base directory specification [1] in order to ensure that we have
write permissions to persist the file. This has the effect that each OS
user will use its jgit config since they typically use different
XDG_CONFIG_HOME directories.
If the environment variable XDG_CONFIG_HOME is defined the jgit config
file is located at $XDG_CONFIG_HOME/jgit/config otherwise the default is
~/.config/jgit/config.
If you want to avoid redundant measurement for different OS users
manually copy the values measured and auto-configured for one OS user to
the system level git config.
[1] https://wiki.archlinux.org/index.php/XDG_Base_Directory
Bug: 551850
Change-Id: I0022bd40ae62f82e5b964c2ea25822eb55d94687
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Thomas Wolf