Commit Graph

9090 Commits

Author SHA1 Message Date
Matthias Sohn 636f377e4e Merge branch 'stable-6.2' into stable-6.3
* stable-6.2:
  If tryLock fails to get the lock another gc has it
  Fix GcConcurrentTest#testInterruptGc
  Don't swallow IOException in GC.PidLock#lock
  Check if FileLock is valid before using or releasing it

Change-Id: I5b6b10622b61fde3f0f10455a74ae159a0b69082
2023-02-22 21:03:52 +01:00
Matthias Sohn 6cc741aa23 Merge branch 'stable-6.1' into stable-6.2
* stable-6.1:
  If tryLock fails to get the lock another gc has it
  Fix GcConcurrentTest#testInterruptGc
  Don't swallow IOException in GC.PidLock#lock
  Check if FileLock is valid before using or releasing it

Change-Id: I3ffe92566cc145053bb762f612dd96bc6d542c62
2023-02-22 21:03:22 +01:00
Matthias Sohn b526829fba Merge branch 'stable-6.0' into stable-6.1
* stable-6.0:
  If tryLock fails to get the lock another gc has it
  Fix GcConcurrentTest#testInterruptGc
  Don't swallow IOException in GC.PidLock#lock
  Check if FileLock is valid before using or releasing it

Change-Id: Idea23e555c024557d7e39a86efe25f609400b962
2023-02-22 21:02:47 +01:00
Matthias Sohn 238f1693f7 Merge branch 'stable-5.13' into stable-6.0
* stable-5.13:
  If tryLock fails to get the lock another gc has it
  Fix GcConcurrentTest#testInterruptGc
  Don't swallow IOException in GC.PidLock#lock
  Check if FileLock is valid before using or releasing it

Change-Id: I708d0936fa86b028e4da4e7e21f332f8b48ad293
2023-02-22 21:02:09 +01:00
Matthias Sohn d9f75e8bb2 If tryLock fails to get the lock another gc has it
Change-Id: Ifd3bbcc5e0591883b774d23256949a83010ea134
2023-02-22 20:38:43 +01:00
Matthias Sohn 1691e38779 Fix GcConcurrentTest#testInterruptGc
With the new GC.PidLock interrupting a running GC throws a
ClosedByInterruptException.

Change-Id: I7ccea1ae9a43d4edfdab2fcfd1324c64cc22b38f
2023-02-22 20:38:29 +01:00
Matthias Sohn 49f5273867 Don't swallow IOException in GC.PidLock#lock
This broke the test GcConcurrentTest#testInterruptGc which expects
ClosedByInterruptException when the thread doing gc is interrupted.

Change-Id: I89e02fc37aceeccb04c20cfc5b71cb8fa21793d6
2023-02-22 19:27:30 +01:00
Matthias Sohn a6da439b47 Check if FileLock is valid before using or releasing it
Change-Id: I23ba67b61b9b03772f33a929c080c0d02b8c8652
2023-02-22 02:56:06 +01:00
Matthias Sohn c70374e641 Merge branch 'stable-6.2' into stable-6.3
* stable-6.2:
  Use Java 11 ProcessHandle to get pid of the current process
  Acquire file lock "gc.pid" before running gc
  Silence API errors introduced by 9424052f

Change-Id: I53cf9675deac0b588048d8224216d2a7e8bd16ec
2023-02-22 01:27:50 +01:00
Matthias Sohn 628ca9bd6f Merge branch 'stable-6.1' into stable-6.2
* stable-6.1:
  Use Java 11 ProcessHandle to get pid of the current process
  Acquire file lock "gc.pid" before running gc
  Silence API errors introduced by 9424052f

Change-Id: I0562a4a224779ccf1e4cc1ff8f5a352e55ab220a
2023-02-22 01:27:16 +01:00
Matthias Sohn 4c111e59d0 Merge branch 'stable-6.0' into stable-6.1
* stable-6.0:
  Use Java 11 ProcessHandle to get pid of the current process
  Acquire file lock "gc.pid" before running gc
  Silence API errors introduced by 9424052f

Change-Id: Ib9a2419253ffcbc90874adbfdb8129fee3178210
2023-02-22 01:26:36 +01:00
Matthias Sohn 2a2a208fa1 Use Java 11 ProcessHandle to get pid of the current process
Change-Id: I790f218601c1d5e1b39c4101e3b2708e76b9d782
2023-02-22 01:06:06 +01:00
Matthias Sohn aa13d1daf5 Merge branch 'stable-5.13' into stable-6.0
* stable-5.13:
  Acquire file lock "gc.pid" before running gc
  Silence API errors introduced by 9424052f

Change-Id: Ibb5c46cb79377d2d2cd7d4586f31c86665d2851c
2023-02-22 01:00:26 +01:00
Matthias Sohn 8eee800fb1 Acquire file lock "gc.pid" before running gc
Git guards gc by locking a lock file "gc.pid" before starting execution.
The lock file contains the pid and hostname of the process holding the
lock. Git tries to kill the process holding that lock if the lock file
wasn't modified in the last 12 hours and was started from the same host.

Teach JGit to acquire this lock before running gc but skip execution if
another process already holds the lock. Killing the other process could
be undesired if it's a long running application.

If the lock file wasn't modified in the last 12 hours try to lock it and
run gc if locking succeeds.

Register a shutdown hook for the lock file to ensure it is cleaned up if
the process is gracefully killed.

Change-Id: I00b838dcbf4fb0d03863bf7a2cd86b743c6c6971
2023-02-21 00:18:33 +01:00
Matthias Sohn 380f091fa5 Silence API errors introduced by 9424052f
Change-Id: Ia9e619a8fa06648086b583c994e4b107ae06c44d
2023-02-21 00:18:33 +01:00
Matthias Sohn 6ea0e11869 Merge branch 'stable-6.2' into stable-6.3
* stable-6.2:
  Fix getPackedRefs to not throw NoSuchFileException
  Add pack options to preserve and prune old pack files
  Allow to perform PackedBatchRefUpdate without locking loose refs
  Document option "core.sha1Implementation" introduced in 59029aec

Change-Id: I765c7302ce84a6a9c28fdef29da2bfaa49477c6e
2023-02-20 20:59:14 +01:00
Matthias Sohn d8155c137e Merge branch 'stable-6.1' into stable-6.2
* stable-6.1:
  Fix getPackedRefs to not throw NoSuchFileException
  Add pack options to preserve and prune old pack files
  Allow to perform PackedBatchRefUpdate without locking loose refs
  Document option "core.sha1Implementation" introduced in 59029aec

Change-Id: Id32683d5f506e082d39af269803bccee0280cc27
2023-02-16 16:59:56 +01:00
Matthias Sohn 07a9eb06ff Merge branch 'stable-6.0' into stable-6.1
* stable-6.0:
  Add pack options to preserve and prune old pack files
  Allow to perform PackedBatchRefUpdate without locking loose refs
  Document option "core.sha1Implementation" introduced in 59029aec

Change-Id: I876a38c2de8b7d5eaacd00e36b85599f88173221
2023-02-16 16:59:09 +01:00
Matthias Sohn c46eb91611 Merge branch 'stable-5.13' into stable-6.0
* stable-5.13:
  Add pack options to preserve and prune old pack files
  Allow to perform PackedBatchRefUpdate without locking loose refs
  Document option "core.sha1Implementation" introduced in 59029aec

Change-Id: I423f410578f5bbe178832b80fef8998a5372182c
2023-02-16 16:48:24 +01:00
Prudhvi Akhil Alahari 012cb77930 Fix getPackedRefs to not throw NoSuchFileException
Since Files.newInputStream is from java.nio package, it throws
java.nio.file.NoSuchFileException. This was missed in the change
I00da88e. Without this change, getPackedRefs fails with
NoSuchFileException when there is no packed-refs file in a project.

Change-Id: I93c202ddb73a0a5979af8e4d09e45f5645664b45
Signed-off-by: Prudhvi Akhil Alahari <quic_prudhvi@quicinc.com>
2023-02-16 16:44:12 +05:30
Matthias Sohn 9424052f27 Add pack options to preserve and prune old pack files
Add the options
- pack.preserveOldPacks
- pack.prunePreserved

This allows to configure in git config if old packs should be preserved
during gc and pruned during the next gc.

The original implementation in 91132bb0 only allows to set these options
using the API.

Change-Id: I5b23ab4f317d12f5ccd234401419913e8263cc9a
2023-02-11 01:19:28 +01:00
Saša Živkov ed2cbd9e8a Allow to perform PackedBatchRefUpdate without locking loose refs
Add another newBatchUpdate method in the RefDirectory where we can
control if the created PackedBatchRefUpdate will lock the loose refs or
not.

This can be useful in cases when we run programs which have exclusive
access to a Git repository and we know that locking loose refs is
unnecessary and just a performance loss.

Change-Id: I7d0932eb1598a3871a2281b1a049021380234df9
(cherry picked from commit cb90ed0852)
2023-02-03 10:18:47 +01:00
Matthias Sohn e55bad514b Document option "core.sha1Implementation" introduced in 59029aec
Bug: 580310
Change-Id: I10f3d6f6b5af7ab96683994c9cbd85e6c18a5084
2023-02-02 21:18:43 +01:00
Matthias Sohn 82e1362e07 Merge branch 'stable-6.2' into stable-6.3
* stable-6.2:
  Shortcut during git fetch for avoiding looping through all local refs
  FetchCommand: fix fetchSubmodules to work on a Ref to a blob
  Silence API warnings introduced by I466dcde6
  Allow the exclusions of refs prefixes from bitmap
  PackWriterBitmapPreparer: do not include annotated tags in bitmap
  BatchingProgressMonitor: avoid int overflow when computing percentage
  Speedup GC listing objects referenced from reflogs
  FileSnapshotTest: Add more MISSING_FILE coverage

Change-Id: I2ff386d9a096277360e6c7bd5535b49984620fb3
2023-02-01 01:10:56 +01:00
Matthias Sohn d8c02aec6a Merge branch 'stable-6.1' into stable-6.2
* stable-6.1:
  Shortcut during git fetch for avoiding looping through all local refs
  FetchCommand: fix fetchSubmodules to work on a Ref to a blob
  Silence API warnings introduced by I466dcde6
  Allow the exclusions of refs prefixes from bitmap
  PackWriterBitmapPreparer: do not include annotated tags in bitmap
  BatchingProgressMonitor: avoid int overflow when computing percentage
  Speedup GC listing objects referenced from reflogs
  FileSnapshotTest: Add more MISSING_FILE coverage

Change-Id: Iff2fba026b49463016015b2fae1a42cf76ee2dbb
2023-02-01 00:54:30 +01:00
Matthias Sohn b5de5ccb9e Merge branch 'stable-6.0' into stable-6.1
* stable-6.0:
  Shortcut during git fetch for avoiding looping through all local refs
  FetchCommand: fix fetchSubmodules to work on a Ref to a blob
  Silence API warnings introduced by I466dcde6
  Allow the exclusions of refs prefixes from bitmap
  PackWriterBitmapPreparer: do not include annotated tags in bitmap
  BatchingProgressMonitor: avoid int overflow when computing percentage
  Speedup GC listing objects referenced from reflogs
  FileSnapshotTest: Add more MISSING_FILE coverage

Change-Id: Ib5055f2f3b8a313c178d6f6c7c5630285ad5a726
2023-02-01 00:41:52 +01:00
Matthias Sohn da21265a14 Merge branch 'stable-5.13' into stable-6.0
* stable-5.13:
  Shortcut during git fetch for avoiding looping through all local refs
  FetchCommand: fix fetchSubmodules to work on a Ref to a blob
  Silence API warnings introduced by I466dcde6
  Allow the exclusions of refs prefixes from bitmap
  PackWriterBitmapPreparer: do not include annotated tags in bitmap
  BatchingProgressMonitor: avoid int overflow when computing percentage
  Speedup GC listing objects referenced from reflogs
  FileSnapshotTest: Add more MISSING_FILE coverage

Change-Id: I58ad4c210a5e7e5a1ba6b22315b04211c8909950
2023-02-01 00:33:20 +01:00
Luca Milanesio 21e902dd7f Shortcut during git fetch for avoiding looping through all local refs
The FetchProcess needs to verify that all the refs received point
to objects that are reachable from the local refs, which could be
very expensive but is needed to avoid missing objects exceptions
because of broken chains.

When the local repository has a lot of refs (e.g. millions) and the
client is fetching a non-commit object (e.g. refs/sequences/changes in
Gerrit) the reachability check on all local refs can be very expensive
compared to the time to fetch the remote ref.

Example for a 2M refs repository:
- fetching a single non-commit object: 50ms
- checking the reachability of local refs: 30s

A ref pointing to a non-commit object doesn't have any parent or
successor objects, hence would never need to have a reachability check
done. Skipping the askForIsComplete() altogether would save the 30s
time spent in an unnecessary phase.

Signed-off-by: Luca Milanesio <luca.milanesio@gmail.com>
Change-Id: I09ac66ded45cede199ba30f9e71cc1055f00941b
2023-02-01 00:07:45 +01:00
Matthias Sohn 7650832002 FetchCommand: fix fetchSubmodules to work on a Ref to a blob
FetchCommand#fetchSubmodules assumed that FETCH_HEAD can always be
parsed as a tree. This isn't true if it refers to a Ref referring to a
BLOB. This is e.g. used in Gerrit for Refs like refs/sequences/changes
which are used to implement sequences stored in git.

Change-Id: I414f5b7d9f2184b2d7d53af1dfcd68cccb725ca4
2023-01-31 23:52:20 +01:00
Matthias Sohn 8040936f8a Silence API warnings introduced by I466dcde6
Change-Id: I510510da34d33757c2f83af8cd1e26f6206a486a
2023-01-31 23:45:07 +01:00
Luca Milanesio ad977f1572 Allow the exclusions of refs prefixes from bitmap
When running a GC.repack() against a repository with over one
thousands of refs/heads and tens of millions of ObjectIds,
the calculation of all bitmaps associated with all the refs
would result in an unreasonable big file that would take up to
several hours to compute.

Test scenario: repo with 2500 heads / 10M obj Intel Xeon E5-2680 2.5GHz
Before this change: 20 mins
After this change and 2300 heads excluded: 10 mins (90s for bitmap)

Having such a large bitmap file is also slow in the runtime
processing and have negligible or even negative benefits, because
the time lost in reading and decompressing the bitmap in memory
would not be compensated by the time saved by using it.

It is key to preserve the bitmaps for those refs that are mostly
used in clone/fetch and give the ability to exlude some refs
prefixes that are known to be less frequently accessed, even
though they may actually be actively written.

Example: Gerrit sandbox branches may even be actively
used and selected automatically because its commits are very
recent, however, they may bloat the bitmap, making it ineffective.

A mono-repo with tens of thousands of developers may have
a relatively small number of active branches where the
CI/CD jobs are continuously fetching/cloning the code. However,
because Gerrit allows the use of sandbox branches, the
total number of refs/heads may be even tens to hundred
thousands.

Change-Id: I466dcde69fa008e7f7785735c977f6e150e3b644
Signed-off-by: Luca Milanesio <luca.milanesio@gmail.com>
2023-01-31 17:14:09 -05:00
Luca Milanesio e4529cd39c PackWriterBitmapPreparer: do not include annotated tags in bitmap
The annotated tags should be excluded from the bitmap associated
with the heads-only packfile. However, this was not happening
because of the check of exclusion of the peeled object instead
of the objectId to be excluded from the bitmap.

Sample use-case:

refs/heads/main
  ^
  |
 commit1 <-- commit2 <- annotated-tag1 <- tag1
  ^
  |
 commit0

When creating a bitmap for the above commit graph, before this
change all the commits are included (3 bitmaps), which is
incorrect, because all commits reachable from annotated tags
should not be included.

The heads-only bitmap should include only commit0 and commit1
but because PackWriterBitPreparer was checking for the peeled
pointer of tag1 to be excluded (commit2) which was not found in
the list of tags to exclude (annotated-tag1), the commit2 was
included, even if it wasn't reachable only from the head.

Add an additional check for exclusion of the original objectId
for allowing the exclusion of annotated tags and their pointed
commits. Add one specific test associated with an annotated tag
for making sure that this use-case is covered also.

Example repository benchmark for measuring the improvement:
# refs: 400k (2k heads, 88k tags, 310k changes)
# objects: 11M (88k of them are annotate tags)
# packfiles: 2.7G

Before this change:
GC time: 5h
clone --bare time: 7 mins

After this change:
GC time: 20 mins
clone --bare time: 3 mins

Bug: 581267
Signed-off-by: Luca Milanesio <luca.milanesio@gmail.com>
Change-Id: Iff2bfc6587153001837220189a120ead9ac649dc
2023-01-31 14:15:56 +01:00
Matthias Sohn 611412a055 BatchingProgressMonitor: avoid int overflow when computing percentage
When cloning huge repositories I observed percentage of object counts
turning negative. This happened if lastWork * 100 exceeded
Integer.MAX_VALUE.

Change-Id: Ic5f5cf5a911a91338267aace4daba4b873ab3900
2023-01-31 14:15:53 +01:00
Matthias Sohn cd3fc7a299 Speedup GC listing objects referenced from reflogs
GC needs to get a ReflogReader for all existing refs to list all objects
referenced from reflogs. The existing Repository#getReflogReader method
accepts the ref name and then resolves the Ref to create a ReflogReader.
GC calling that for a huge number of Refs one by one is very slow. GC
first gets all Refs in bulk and then calls getReflogReader for each of
them.

Fix this by adding another getReflogReader method to Repository which
accepts a Ref directly.

This speeds up running JGit gc on a mirror clone of the Gerrit
repository from 15:36 min to 1:08 min. The repository used in this test
had 45k refs, 275k commits and 1.2m git objects.

Change-Id: I474897fdc6652923e35d461c065a29f54d9949f4
2023-01-23 17:19:14 +01:00
Matthias Sohn 5bd2832134 Merge branch 'stable-6.2' into stable-6.3
* stable-6.2:
  Cache trustFolderStat/trustPackedRefsStat value per-instance
  Refresh 'objects' dir and retry if a loose object is not found

Change-Id: Ibc9bffab8c9ef9c39384b53c142d99878f7f3f98
2023-01-13 19:32:06 +01:00
Matthias Sohn 9eef6790cf Merge branch 'stable-6.1' into stable-6.2
* stable-6.1:
  Cache trustFolderStat/trustPackedRefsStat value per-instance
  Refresh 'objects' dir and retry if a loose object is not found

Change-Id: I9e876f72f735f58bf02c7862a3d8e657fc46a7b9
2023-01-13 19:31:18 +01:00
Nasser Grainawi 21b2aef0aa Cache trustFolderStat/trustPackedRefsStat value per-instance
Instead of re-reading the config every time the methods using these
values were called, cache the config value at the time of instance
construction. Caching the values improves performance for each of the
method calls. These configs are set based on the filesystem storing the
repository and unlikely to change while an application is running.

Change-Id: I1cae26dad672dd28b766ac532a871671475652df
Signed-off-by: Nasser Grainawi <quic_nasserg@quicinc.com>
2023-01-13 18:45:02 +01:00
Kaushik Lingarkar fed1a54935 Refresh 'objects' dir and retry if a loose object is not found
A new loose object may not be immediately visible on a NFS
client if it was created on another client. Refreshing the
'objects' dir and trying again can help work around the NFS
behavior.

Here's an E2E problem that this change can help fix. Consider
a Gerrit multi-primary setup with repositories based on NFS.
Add a new patch-set to an existing change and then immediately
fetch the new patch-set of that change. If the fetch is handled
by a Gerrit primary different that the one which created the
patch-set, then we sometimes run into a MissingObjectException
that causes the fetch to fail.

Bug: 581317
Change-Id: Iccc6676c68ef13a1e8b2ff52b3eeca790a89a13d
Signed-off-by: Kaushik Lingarkar <quic_kaushikl@quicinc.com>
2023-01-13 18:44:35 +01:00
Nasser Grainawi 2011fe06d2 FileSnapshotTest: Add more MISSING_FILE coverage
Add a couple tests that confirm what the docs say about isModified() and
equals(MISSING_FILE) behavior.

Change-Id: I6093040ba3594934c3270331405a44b2634b97c5
Signed-off-by: Nasser Grainawi <quic_nasserg@quicinc.com>
2023-01-06 14:23:12 -07:00
Matthias Sohn e4c2331af6 Merge branch 'stable-6.2' into stable-6.3
* stable-6.2:
  Introduce core.trustPackedRefsStat config
  Fix documentation for core.trustFolderStat

Change-Id: I48b6c095ac62dc859829d6fef45325accbb0a144
2023-01-05 16:05:14 +01:00
Matthias Sohn 62ed46da16 Merge branch 'stable-6.1' into stable-6.2
* stable-6.1:
  Introduce core.trustPackedRefsStat config
  Fix documentation for core.trustFolderStat

Change-Id: Ic78630f74c72624932a384eed52ef79ae1eff3e5
2023-01-05 15:55:19 +01:00
Kaushik Lingarkar 82b5aaf7e3 Introduce core.trustPackedRefsStat config
Currently, we always read packed-refs file when 'trustFolderStat'
is false. Introduce a new config 'trustPackedRefsStat' which takes
precedence over 'trustFolderStat' when reading packed refs. Possible
values for this new config are:

* always: Trust packed-refs file attributes
* after_open: Same as 'always', but refresh the file attributes of
              packed-refs before trusting it
* never: Always read the packed-refs file
* unset: Fallback to 'trustFolderStat' to determine if the file
  attributes of packed-refs can be trusted

Folks whose repositories are on NFS and have traditionally been
setting 'trustFolderStat=false' can now get some performance improvement
with 'trustPackedRefsStat=after_open' as it refreshes the file
attributes of packed-refs (at least on some NFS clients) before
considering it.

For example, consider a repository on NFS with ~500k packed-refs. Here
are some stats which illustrate the improvement with this new config
when reading packed refs on NFS:

trustFolderStat=true trustPackedRefsStat=unset: 0.2ms
trustFolderStat=false trustPackedRefsStat=unset: 155ms
trustFolderStat=false trustPackedRefsStat=after_open: 1.5ms

Change-Id: I00da88e4cceebbcf3475be0fc0011ff65767c111
Signed-off-by: Kaushik Lingarkar <quic_kaushikl@quicinc.com>
2023-01-05 15:52:36 +01:00
Kaushik Lingarkar 52aa9c81fc Fix documentation for core.trustFolderStat
Update documentation for core.trustFolderStat to highlight that it is
also used when reading the packed-refs file.

Change-Id: I3eac377c3a7f48493abc8ae6d0889ee70a05d24d
Signed-off-by: Kaushik Lingarkar <quic_kaushikl@quicinc.com>
2022-12-14 12:27:34 -08:00
Matthias Sohn 246981c850 Merge branch 'stable-6.2' into stable-6.3
* stable-6.2:
  Remove unused imports
  Suppress non-externalized String warnings
  Remove unused API problem filters
  Silence API errors
  Silence API errors
  Silence API warnings

Change-Id: I71aa9f890c5eb05849ad16a00b9974da5e51171e
2022-11-20 20:22:24 +01:00
Matthias Sohn af87046e56 Remove unused imports
Change-Id: I57a3ae0a8608a517d9cc5cc27cee136f9faeb810
2022-11-20 20:18:01 +01:00
Matthias Sohn 3301032c6a Suppress non-externalized String warnings
Change-Id: I95c61bd906bd3f7cdea9581e0ffa92ec607c6140
2022-11-20 20:16:28 +01:00
Matthias Sohn f67cca6cb3 Remove unused API problem filters
Change-Id: I890716bc052dcce2ce136040035b442247c08332
2022-11-20 20:14:20 +01:00
Matthias Sohn 71f50e52af Merge branch 'stable-6.1' into stable-6.2
* stable-6.1:
  Silence API errors
  Silence API errors
  Silence API warnings

Change-Id: Id3efa1b32710661cde63e93c5b8832785a805415
2022-11-20 20:10:37 +01:00
Matthias Sohn fec271c11b Silence API errors
Change-Id: I07c42fe9417edb0570dd475a7e935112a878a93b
2022-11-20 20:09:56 +01:00
Matthias Sohn 97ad9bdae6 Merge branch 'stable-6.0' into stable-6.1
* stable-6.0:
  Silence API errors
  Silence API warnings

Change-Id: I2b8336652e60dec97666582cf9331c8505729473
2022-11-20 20:08:42 +01:00